| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0053 |
|---|
| Symbol | |
|---|
| ID | 4270922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 56926 |
|---|
| End bp | 57741 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638124778 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_740900 |
|---|
| Protein GI | 114319217 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGA CAGCGCCCAT TGCGGGCCCG GAGACCGTGC CAGCGGAGGC ACCCGAACCC
GCGGGCGGTC GGGGTACGCT CGTACCCGAG GAGCCGCACA CCGCCTTCCG CCTGCGTGGC
CACAGCCCGA ATCCGCTGGT GGACGCGGCC AGCCCGCTGC TGGGCCTGGT CATCCGAGTC
CGCGAGCTGG AGGTGCTGGA CGATGTGGCC GCGCTCTACC GGCAAGTGGT GGAGGACATC
GGTGCCATCG AGCTCGAGCT CACCGAGCAG GGTCTCGACC GCCCCACGCT GCTGGCCTAT
CGCTACGTCT TGTGCACCTT CGTCGACGAG GCGGTGATGG GGACCGAGTG GGGCCAGCAG
AGCGATTGGT CCCGGCACTC GTTGCTGGCC CGGTTTCACA ACGAGACCTG GGGCGGCGAG
AAGGTCTTCG CCATCCTGGC CCGGCTGCAA CAGGAGCCCC AGCGCTACGA GCCACTGCTC
ACCTTCATCT ACATCTGCTT CAGCCTGGGT TTCCAGGGGC GCTACCGCAT CCGCCCCGAC
CGACGCGAGG AGTACGAGCG GATCGTCCGT TCATTGGGGG AGCAACTCTC TAGCCTGCAG
CCGTCCGGCG ACGAGAACCT GACCGAACCC GAGCGCCATA TCGCGCCCGC CGGCTGGCGA
TCCGGCGAGG GGGTGCCGGC CTGGTTGATC CCGGCCTTGT CCGTCCTGGT CGCAGTCGGC
CTGTACCTGG CCATATCCTG GTCCTTGGAC CAACAGGCCG CCGAGGTCCA CGCCTTCCTG
CACCAGGTCT TCGCGGACAT GGGTGACGCA TCGTGA
|
|---|
| Protein sequence | MSMTAPIAGP ETVPAEAPEP AGGRGTLVPE EPHTAFRLRG HSPNPLVDAA SPLLGLVIRV
RELEVLDDVA ALYRQVVEDI GAIELELTEQ GLDRPTLLAY RYVLCTFVDE AVMGTEWGQQ
SDWSRHSLLA RFHNETWGGE KVFAILARLQ QEPQRYEPLL TFIYICFSLG FQGRYRIRPD
RREEYERIVR SLGEQLSSLQ PSGDENLTEP ERHIAPAGWR SGEGVPAWLI PALSVLVAVG
LYLAISWSLD QQAAEVHAFL HQVFADMGDA S
|
|---|
| |