Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0052 |
Symbol | |
ID | 4270921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 55586 |
End bp | 56923 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638124777 |
Product | hypothetical protein |
Protein accession | YP_740899 |
Protein GI | 114319216 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.808473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTGCC GTAACCGAGT CGTTTGGCGT GAAGGGGCGT TCATCAAACC GCACCACTTC CAGCAACAAC AGCGCAGCCT CGAGGGGCTG CTGGACCTGC GGCTGCAGGC GGTCAGCGGC TACAGCCACG GCTTCCTGCA ACTGGAACTG AACAGCGAAT TCCTGGGCTT CGGCCGGATT GCGCTCACCC GGGCCCGCGG CATCATGCCG GACGGCACCG CCTTCGACCT GCCGGGCGAT GACCTGGAGC CACCACCACT GGCCGTGGAC GAGGCCGGCA TGGCCAACCA GCGGGTCTAC CTGGGGCTGC CCCTGGCCGG TGATGGCGTG GCCGAGGTCA GCGACGAGGA CGCCATCAGG GATGATGGCC GCTACCGCCT GCATCGCCGG GAGATCTGGG ATCTTCACAC CAGTCCTGGA GATGTCGCTG AACTGGCGGT GGCCCGCGCC GCCCCGCGCC TGCTGTTGGA GCACGATGAC CGCAGCGGTT ATGCCTGCCT GGCAGTGGCG CGGATACTGG AGCGGCGCCC GGATGGTTCA CTGGTACTCG ATCCCGACTT TATCCCCACC ACCCTGACCA CCCGGGTGGC GCCCGGCCTG CAGCGGTTCA TTGGTGAGGT GGCCGGGTTG ATGCAGGCGC GAGCGCGTCG GATCGCACAG CGGCTGGCCG CTCCGCAGCA GGCCGGGGTG GCTGATGTCT CCGACTTCAT GCTGCTGCAA TTGCTGAACC GCCTGCAGCC CCGGTTCCAG CACCTGCAAC AGCACCGGCG GCTGCACCCG GAGGCCCTCT ACAGCCACAT GCTGGAGGCC TGCAGCGAAC TGGCGACCTT CACCGACGAG TCGCGGTTGC CCCGGCGCTA TCCTCCCTAC GACCACGATG CCCCCGATAC CGCCTTCCGT GCGCTCATGC AGGGGCTCCG TCAGGCTCTC TCCACCGTGC TGGAGGCCCG AGCGGTGGCC ATTCCCCTGG AGGCCCGCCG TCACGGGCTC ATGCTCGCGC CGCTAAGCGA TTCGACGCTG CTGGACGAGG CCGAGTTCGT GGTCGCCGTG CGCGCGGACA TGGCGGTGGA GACGCTGCGC CGACAGTTCA TCCAGCAGAC GAAGATCGCC GGTATCGAAC GCATCCGCGA CCTGGTCAGT CTGCAACTGC CCGGCATTCC GCTCGTTCCG CTGCCGGTCG CGCCGCGCCA GCTCCCCTAT CACGCGAGTC ATATCTACTT CCAGCTCGAC CGTCGCAGCG AGGCCTGGGG CCTGCTGACC GGTGCGAGCG GTTTCGCCTT CCACCTGGGT GGTGACTTCC CAGGGCTGGA TCTCCAGTTC TGGGCAATAA GGAGTTGA
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Protein sequence | MVCRNRVVWR EGAFIKPHHF QQQQRSLEGL LDLRLQAVSG YSHGFLQLEL NSEFLGFGRI ALTRARGIMP DGTAFDLPGD DLEPPPLAVD EAGMANQRVY LGLPLAGDGV AEVSDEDAIR DDGRYRLHRR EIWDLHTSPG DVAELAVARA APRLLLEHDD RSGYACLAVA RILERRPDGS LVLDPDFIPT TLTTRVAPGL QRFIGEVAGL MQARARRIAQ RLAAPQQAGV ADVSDFMLLQ LLNRLQPRFQ HLQQHRRLHP EALYSHMLEA CSELATFTDE SRLPRRYPPY DHDAPDTAFR ALMQGLRQAL STVLEARAVA IPLEARRHGL MLAPLSDSTL LDEAEFVVAV RADMAVETLR RQFIQQTKIA GIERIRDLVS LQLPGIPLVP LPVAPRQLPY HASHIYFQLD RRSEAWGLLT GASGFAFHLG GDFPGLDLQF WAIRS
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