Gene Mlg_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0002 
Symbol 
ID4269606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp1651 
End bp2751 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content64% 
IMG OID638124729 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_740851 
Protein GI114319168 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.66477e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.315264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG ATATCCAACG CGAAGACCTG CTCAAGCCTC TACAAGCCAT CATCGGCGTC 
GTGGAACGAC GGCAGACCCT GCCGGTGCTG GCCAACGTCC GCCTGGAGTT GGGCGACGGC
CTGGCCCGGC TGACCGCTAC CGATCTGGAA GTGGAACTGG TCGCCAGTCT GCCCTGCCAA
GTCACGGAAG GCGGGGACAT CACACTGCCG GCGAGGAAGC TGCTGGATAT TTGTCGCAAC
CTGCCGGATC AGAGTCAGAT CCAGCTTCAG GTCGACGGCG AACGGGCGAG TCTGCGGGCC
GGGCGGAGTC GGTTCACCCT CGCCACACTG TCGGCGGACG ATTACCCGAG CATCGAAGAC
ATTGGCGCCC GGGAGACCGT GCGGCTGCCC CAGGGGCAAC TGAGGAAGCT GATTGAGCGC
ACACACTTTT CCATGGCCGT GCAGGATGTC CGGTACTATC TGAACGGGCT GATGGTGGAG
CTGGAACCGG CGATGGCGCG CATGGTGGCC ACCGACGGCC ACCGCCTGGC ACTGGCCGAG
CAAGCCATCG ACACCGGGGT CGAGGCACCG CGTCAGGTGA TTGTCCCGCG CAAGGGGGTT
CAGGAACTGT TACGGTTGTT GGATCACAGC GATGAGGGGG CCGACCTGGA GTTGGGCGAC
AACCATATCC GGGTCAAGCT CGGGGACGTC CGGTTCACCT CCAAATTGAT CGATGGCCGC
TTCCCGGACT ACCGTCGGGT GGTGCCGGAG GCCACCGAGA CCCCCGCGAC AGTGAATCGG
GAGGACCTTC GCCACGCCCT CCTCCGGGTC TCGATCCTAT CCAACGAAAA GTACCGCGGT
GTCCGGTTCC TGCTCGACGG TGGTACGCTC AAGGTCGCAT CGCACAACCC CGAGCAGGAG
GAGGCCGAAG AGGAGGTCTC GGTCGACTAC GGCGGGGCCC CGCTGGAGGT CGGCTTCAAT
GCCGGGTATG TGCTCGATGC GCTGGGGGCG TTGGACGATG AGGATGTTCG CCTGACACTC
CGGGACAGCG CGAGCAGTGG GCTGATCCAA GGGGTAGACG ACCAGACCTC AAGGTACGTC
GTCATGCCCA TGCGCCTGTG A
 
Protein sequence
MRIDIQREDL LKPLQAIIGV VERRQTLPVL ANVRLELGDG LARLTATDLE VELVASLPCQ 
VTEGGDITLP ARKLLDICRN LPDQSQIQLQ VDGERASLRA GRSRFTLATL SADDYPSIED
IGARETVRLP QGQLRKLIER THFSMAVQDV RYYLNGLMVE LEPAMARMVA TDGHRLALAE
QAIDTGVEAP RQVIVPRKGV QELLRLLDHS DEGADLELGD NHIRVKLGDV RFTSKLIDGR
FPDYRRVVPE ATETPATVNR EDLRHALLRV SILSNEKYRG VRFLLDGGTL KVASHNPEQE
EAEEEVSVDY GGAPLEVGFN AGYVLDALGA LDDEDVRLTL RDSASSGLIQ GVDDQTSRYV
VMPMRL