Gene Shewmr7_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_4023 
Symbol 
ID4257881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4779907 
End bp4780701 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content43% 
IMG OID638124715 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_740057 
Protein GI114049507 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.040016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.910655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA CTGGTGAAGC GTTAACACCG CAGGGCTATA TCCAGCATCA CCTTACCAAC 
TTACACGTTG GTGAAGGTTT CTGGACATGG CACATTGATT CGTTGTTCTT TTCGGTTGGT
CTTGGTGTTC TGTTCCTGTG GATTTTCCGT AGTGTTGGTA AAAAAGCGAC TTCAGGTGTT
CCCGGTAAGC TGCAATGCTT TATCGAGATG ATCGTTGAGT TCGTTGATAA CAGCGTGAAA
GAAAGTTTTC ATGGCCGCAA TGCCCTGATC GCGCCTTTAG CTCTGACCAT TTTTGTATGG
GTATTCATGA TGAACTTCAT GGATATGCTT CCTGTTGACT GGCTGCCTTG GTTAGCTAGT
TTAGCGGGCG TTCCATACTT AAAAGTGGTT CCGACGACTG ATGTAAACAT CACCTTCAGC
TTAGCTATTG GTGTGTTTGT GCTGATTATT TACTACAGCA TTAAGGTCAA AGGCGTGTCT
GGTTTTGTTA AAGAACTGAC GCTACAGCCC TTTAACCATA AGGCAATGAT ACCCGTCAAC
CTCCTATTAG AGACTGTTAC CTTAATCGCT AAACCAATTT CATTGGCATT GCGTCTATTC
GGTAACTTGT ACGCAGGTGA GTTGATCTTC ATCCTTATTG CGCTGATGTA TGGTACCAAC
TTGTTATTAT CTTCCCTGGG TGTGACTCTG CAACTAGGTT GGTTAATTTT CCACATTTTG
GTTATCACGC TGCAGGCGTT TATCTTCATG ATGTTGACCA TTGTTTACTT AAGCATGGCA
CATGAAGATC ATTAA
 
Protein sequence
MAATGEALTP QGYIQHHLTN LHVGEGFWTW HIDSLFFSVG LGVLFLWIFR SVGKKATSGV 
PGKLQCFIEM IVEFVDNSVK ESFHGRNALI APLALTIFVW VFMMNFMDML PVDWLPWLAS
LAGVPYLKVV PTTDVNITFS LAIGVFVLII YYSIKVKGVS GFVKELTLQP FNHKAMIPVN
LLLETVTLIA KPISLALRLF GNLYAGELIF ILIALMYGTN LLLSSLGVTL QLGWLIFHIL
VITLQAFIFM MLTIVYLSMA HEDH