| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_4014 |
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| Symbol | |
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| ID | 4257872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4770241 |
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| End bp | 4772370 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638124706 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_740048 |
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| Protein GI | 114049498 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00017833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTTA AATATTCAGT TGTGGGTTTG GCCGTTGGGT CTGCATTAAT AGCGGCTATG
CCTGTCATGG CCGAAGCGCC AAATGATACA AACATTGAGC GTATTAATGT CACTGGCCGT
ACTTTTAATG ACTATAAAGT CGGCAGTGCA TCGGGCGCTA TGCGTGGTGA TATCGATTTA
ATGGATACCC CACAATCAGT GAATGTGATC CCCGACTTTG TGACCGATGA GCAATTAGCG
ACTAACCTTG CCGAAGTCTT AGTTAACGAT TCAAGTGTTA CTGCGGGTAC CACTCGTTGG
AACCGCCAAG TCTTCAGTAT TCGTGGTTTT GAATTAGATT CGGGCAACGG TTATCTGATC
AACGGCCACC AGCAATGGTC TCATTACGTC CAACCTATCG AAACCCTGCA ACAGGTTGAA
GTGCTTAAAG GCCCTTCGAG CATGTTGTAT GGCCAATCTG GTCCTGGCGG TTTGGTGAAT
ATGGTCACCA AGAAGCCTAC CTACGATTCT ATGCTCAACT TAGGGTTTGA TACTGACGGT
TACGGCTCTA CCCGCGCACA GTTAGACGCT GGTGGCAGCT TAAACGAGGC TCAGAGCATT
CGTTACCGCG GTGTGTTAGT CAAACAAGAC ACCAAATACT GGCGTGAATA TTCAACGACC
GATGAAAACC AAGAGCGTGA TCGTTGGTTA GGTTATTTGA ACCTAGAATT CGATATCAGT
GATGATTTGT TATTGTCACT GAAATACGAC CATACCCAAG ATAAAACCGG TATCGATGCT
GGCAGTTGGT TAGATAAGCA AGGCAATGTT GTTGGCCAGC GTAAAACCAT CTGGGATGCG
CCTTGGGCCT TTACCGATAA CACGGTTTCA AATTTAGGTG CCGATTTAAC TTGGCATATG
AATGACGATT GGAAAGTTAA ACTGGGTTAT AACGATCAAC AGTTTAATCG CCAGCGTTTC
GATTCAGCGC CGCAATATAA TGAAGATCCA TTTACTAGTG GTTATAAAAT AAAGCCATTC
GATCGTTACG ACGACTGGCA ACATAAAACC GCTTATGTCG ATTTTACGGG CGAGTTTGCA
TTAGCGGGTA TGGAGCACCA ACTCCTTATA GGTGCTAACT ACTTAGACTA CTATTATGGT
CAATATATTG AGAGATATGT TAATCAAGCA ACCAAAGGGA TGATTACAGT TATTCCTGGT
CAACCCGTAG CGAAACCAGA TTTAGACTAT CATCGTGATA GCACAAAATC TGAAAGTGAA
TACAAATACT ACGGTTTCTA TCTACAAGAT TTAATGACCA TCAATGAACA ATGGAAATTG
CTCGCAGGGG TTCGTTATGA CGAACAGAAA AAAGATGGAT TTGGTGAAAA CAGTTATGCC
GTATCGCCTA AATTTGGGGT GATCTACTCA CCAATGACCA ATGGCAGCAT ATATGTTAAC
TACTCTAAGA GCTTTACACC GCAAGGTGGT ATTACCGACC CTCTAAATGT TAATTATGAC
ACTAACCTCA AACCAGAATA TGGCATTCAA TATGAAGTGG GGACTAAGTG GGAACTGTTT
GACGATAGCT TGTTATTAAC GGCTGCGGTA TTTGATGTCA CGCTGGAGAA TATTTCTATA
AATGAGGTGC TGACGGCAAG TGACCCACTA AGTGAAGATG GAAAATACAC TTCAATTACC
ACCCAAGGCG GAGAGCAAAA ACACCGCGGC TTTGAAGTCG GTGCCCAAGG TAAGCTAGGC
GATAGCTGGT TTGTGACTTC ATCTATGATG TACCTCGATG CTGAGTATCA AACGGGTGAT
GAGCGCGAAG GTAAAACTCC TATCGATGCC CCTGAATGGT CGGCCAATAT CTGGACTCGT
TATGAAGTAA CCGATAACTT TGCAATGAAC TTCGGTGCTA TCTATGTTGG CGAGCGTTTT
GCAAAAGTGG ATAACACTAT CAGTAAAGAC GGTTATGTCC GCTTCGATAT CGGTGCTGCC
TACACTATGG ATTTTATGGG TAAAGACGTA AGCATCCGCG CGAACGTAAG AAACCTGTTT
GATACCGATT ATATCGATGG CGGCCAATAC AATATGGTGA CTCTAGGCCA AGACCGTAAC
TTCAGCGTGG CACTTGAAGC TAAGTTCTAA
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| Protein sequence | MVFKYSVVGL AVGSALIAAM PVMAEAPNDT NIERINVTGR TFNDYKVGSA SGAMRGDIDL
MDTPQSVNVI PDFVTDEQLA TNLAEVLVND SSVTAGTTRW NRQVFSIRGF ELDSGNGYLI
NGHQQWSHYV QPIETLQQVE VLKGPSSMLY GQSGPGGLVN MVTKKPTYDS MLNLGFDTDG
YGSTRAQLDA GGSLNEAQSI RYRGVLVKQD TKYWREYSTT DENQERDRWL GYLNLEFDIS
DDLLLSLKYD HTQDKTGIDA GSWLDKQGNV VGQRKTIWDA PWAFTDNTVS NLGADLTWHM
NDDWKVKLGY NDQQFNRQRF DSAPQYNEDP FTSGYKIKPF DRYDDWQHKT AYVDFTGEFA
LAGMEHQLLI GANYLDYYYG QYIERYVNQA TKGMITVIPG QPVAKPDLDY HRDSTKSESE
YKYYGFYLQD LMTINEQWKL LAGVRYDEQK KDGFGENSYA VSPKFGVIYS PMTNGSIYVN
YSKSFTPQGG ITDPLNVNYD TNLKPEYGIQ YEVGTKWELF DDSLLLTAAV FDVTLENISI
NEVLTASDPL SEDGKYTSIT TQGGEQKHRG FEVGAQGKLG DSWFVTSSMM YLDAEYQTGD
EREGKTPIDA PEWSANIWTR YEVTDNFAMN FGAIYVGERF AKVDNTISKD GYVRFDIGAA
YTMDFMGKDV SIRANVRNLF DTDYIDGGQY NMVTLGQDRN FSVALEAKF
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