Gene Shewmr7_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_4001 
Symbol 
ID4257859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4748858 
End bp4749412 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content47% 
IMG OID638124690 
Producthypothetical protein 
Protein accessionYP_740035 
Protein GI114049485 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.121939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA GCAAGAAAAC ACGCAAGGGC GGCGATAATA GCCCTAAATT ACAGCCAAGA 
GTGAAAAAGC AGGACCGTGC AGAAGTCACT GGCAAGCGCG CCGAAAAGGG CAACAAGTCT
GGCAGCCGTC ATAATGAAGC ACTGATCCAA GCCCAAGCTC CACAGAAAAC GGCTGCACAG
AAGAAAGATC CTCGCCATGG CAGCAAAAAA CCAGTGGCAT TGGCAGTGCC GACTGCAACA
GAAAAACCTG CCACACCAAA GGTTAAGCAG CCCAAGTTAA CCGACGAGCA AAAACTATTG
AAGCTGGAAG AAGATCCAAG ACTAAACCAG TTGCTCGATA TGTTGGAAGA AGGCCGCAAC
TTAAGCGATG CCGACCAGCA ATGGTTGGAT CAGCAGTTGA ACAAAATTGA AGCCCTGATG
ATTAAACTGG GTATCAACGA TGAGTTAGAA GATGAAGCGC CAGCGAAAAA ATCTAAAGTC
GATTCAGATG ATGACCTGTT CGATCGCTTT GAATCGGGTG CCGAGCTGCT AAAAGATTAT
CAAGATAAGT TTTAA
 
Protein sequence
MSRSKKTRKG GDNSPKLQPR VKKQDRAEVT GKRAEKGNKS GSRHNEALIQ AQAPQKTAAQ 
KKDPRHGSKK PVALAVPTAT EKPATPKVKQ PKLTDEQKLL KLEEDPRLNQ LLDMLEEGRN
LSDADQQWLD QQLNKIEALM IKLGINDELE DEAPAKKSKV DSDDDLFDRF ESGAELLKDY
QDKF