| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3995 |
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| Symbol | |
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| ID | 4257853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4740151 |
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| End bp | 4740993 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124684 |
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| Product | rhomboid family protein |
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| Protein accession | YP_740029 |
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| Protein GI | 114049479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00110696 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0215487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAGA TTGGCAGACT CCCCAACAGC AGAGCCGCGC AGGCCTTTGT CGATTACCTC
AAAGGTGAAC AGATAGACTG CCAGATTCAG CCATTGCCGC AGGGAGTCGC TATTCTGGTT
ATCCGCGATC AAGATGCCGA GAAAGCCCGT AAAGAGTTCG CCCATTTTAT CGCTCATCCT
TACGATAACA AATACTTACA AGCCTCGTGG GAGCATGGTG ATACTCATAC TAAGCTCGAC
TATGGCGCCC CTTCTTTACA GCTTTTTGCG CAATTTATCA CAGGTGCAGG CCCAGTTACT
CTTATCATCT TTGGCCTCTG TGTACTGATT TATGCCGCGA TGAATTTAGG CTTCGGCGGC
CCAGTTTATG AAACGCTCTC CTATTTCGGT GCGGTACCTG ACACCAGCGT TAGTCAATTC
TGGCGCGTAT TTACCCCAAG CCTGATGCAC TTTTCGGCCA TGCATATCAT CTTCAACTTA
CTCTGGTGGT GGTATTTGGG TGGAAAAATC GAGACTCGCA TCGGCACAGC CCCGCTGTTA
ATCCTGCTAC TGGTCGCGGG TACTTTACCC AATGTCATCC AATACTATGT TAGCGGCCCC
AACTTTGGCG GGCTGTCGGG CGTAGTGTAT GCCGTCGCCG GTTACACTTG GGTCATGGGG
ATCCGCAAAC CCGCAGCAGG AATAGGTTTA CCGCCCTCCT ACATGGGATT TATGTTGATT
TGGCTGGTGT TAGGCTTTAC GGATTTCTTA GGCGTGTCAG TGGCGAATGG CGCCCATATT
GGCGGATTAC TGATAGGTCT CGCCCAAGGC TGGTTCGATA GCCGCAGTAA AGTCACTCGC
TAA
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| Protein sequence | MIEIGRLPNS RAAQAFVDYL KGEQIDCQIQ PLPQGVAILV IRDQDAEKAR KEFAHFIAHP
YDNKYLQASW EHGDTHTKLD YGAPSLQLFA QFITGAGPVT LIIFGLCVLI YAAMNLGFGG
PVYETLSYFG AVPDTSVSQF WRVFTPSLMH FSAMHIIFNL LWWWYLGGKI ETRIGTAPLL
ILLLVAGTLP NVIQYYVSGP NFGGLSGVVY AVAGYTWVMG IRKPAAGIGL PPSYMGFMLI
WLVLGFTDFL GVSVANGAHI GGLLIGLAQG WFDSRSKVTR
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