Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3974 |
Symbol | |
ID | 4255979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4718263 |
End bp | 4719078 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638124663 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_740008 |
Protein GI | 114049458 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.715653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGAAT TACCAGAAGT CGAAGTCACC CGTCAGGGCA TTGCCCCACA TCTTGTCGAA CAAACCGTGG TTGACCTCAT TGTCCGTAAT GCCTCATTGC GTTGGCCCGT TCCCGAACTT GCCAAACAGA TCATCGGCCA AACCATACGC CAAGTACGCC GCCGCGCAAA ATACCTGTTA ATCGATACCG ATGCCGGCAC CAGCATAGTG CATTTAGGGA TGTCGGGCAG CTTGCGGATC CTCCCCCATG ACACGCCAGT GGAGAAGCAC GACCATATCG ATCTCGTCCT CGCCAACGGC CGTATTCTGC GCTTTAACGA TCCGAGGCGT TTCGGTGCTT GGTTATGGTG CCAACTGCCG GAGGAAGCCC ATCCGCTACT GGAAAAACTC GGGCCAGAAC CTTTAACCGA TGCCTTTAAC GTCAATCAGT TAGCTGCCGC ACTGGCGGGC AAGAAGAAGG CCATCAAACT CTGCCTGATG GATAACCATA TTGTGGTGGG TGTGGGAAAT ATTTACGCCA ACGAAGCACT GTTTGCCGCA GGGATACATC CCGAGGCAGA AGCAGGCAAG ATAGATATTG AACGCTTAAC GGTACTGGTT GCCGAGGTCA AACAAATCCT CGCCCACGCC ATAAAGCAGG GCGGCACTAC GCTTAAGGAC TTCACCAATG CCGAGGGTAA ACCTGGCTAT TTCGCACAAA AACTGCATGT TTACGGCCGC GGCGGCGAAA CTTGCACTCA GTGCGGCAAT CTACTCAGCG AAATCCGCCT GGGTCAACGC ACCACAGTAT TTTGCGGCAT CTGCCAGACG CGTTAA
|
Protein sequence | MPELPEVEVT RQGIAPHLVE QTVVDLIVRN ASLRWPVPEL AKQIIGQTIR QVRRRAKYLL IDTDAGTSIV HLGMSGSLRI LPHDTPVEKH DHIDLVLANG RILRFNDPRR FGAWLWCQLP EEAHPLLEKL GPEPLTDAFN VNQLAAALAG KKKAIKLCLM DNHIVVGVGN IYANEALFAA GIHPEAEAGK IDIERLTVLV AEVKQILAHA IKQGGTTLKD FTNAEGKPGY FAQKLHVYGR GGETCTQCGN LLSEIRLGQR TTVFCGICQT R
|
| |