Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3905 |
Symbol | |
ID | 4257937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4641006 |
End bp | 4641479 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638124594 |
Product | redoxin domain-containing protein |
Protein accession | YP_739939 |
Protein GI | 114049389 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.105906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.263362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCTC AAGGTCAAAC ATTACCAGCG GCGACGCTAA GCCAACTAAC TAAAGATGGC ATGGTAAATC ATCAAGTTAC CGAGCTGTTC GCGGGTAAAA AAGTGGTGTT ATTTGCAGTG CCTGGTGCTT TCACACCAAC CTGTTCTGAA GCGCATTTGC CAGGTTATGT GGTGCTTGCC GATCAATTTA AAGCCAAAGG CGTTGATTTA ATTGCCTGTG TATCGGTAAA CGATGCCTTT GTGATGAAAG CATGGGGCGA AGCGCAAAAT GCGTCTGAGT TACTGATGCT TGCCGATGGC GATGCCAGCT TTACTAAGGC GCTTGGACTC GAAATGGATA CCGCTGGCTT TGGCGGTGTG CGTTCACAAC GTTATGCGAT GATCATCGAT AACGGCGTGG TGACTTTACT GAATGTAGAA GCACCTAAGT CATTTGAAGT GAGTAAAGCC GAAGTGGTAT TAGCGGCACT TTAA
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Protein sequence | MIAQGQTLPA ATLSQLTKDG MVNHQVTELF AGKKVVLFAV PGAFTPTCSE AHLPGYVVLA DQFKAKGVDL IACVSVNDAF VMKAWGEAQN ASELLMLADG DASFTKALGL EMDTAGFGGV RSQRYAMIID NGVVTLLNVE APKSFEVSKA EVVLAAL
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