| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3872 |
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| Symbol | |
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| ID | 4254816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4595952 |
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| End bp | 4596854 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124561 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_739906 |
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| Protein GI | 114049356 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC CACTCTCTAT CAGCAGTCAC CCCAGTATCC ATTTGGCTTG GCGTGCCTAT
TTCGAGATGA CCAAACCTAA GGTTGTGGCT TTAATGCTGC TCACCGTCTT AGTCGGCATG
TGTTTAGCCA TGCCTACCAT ACTACCAGTC AAACCTTTAG TGGCAGGCTT ACTCGGCATC
GCCATGATGG CGGGGTCGGC CGCCGCTTTA AACCATCTGA TTGATAGGCG AATCGACGGC
ATGATGGCAC GCACTTATAA CCGTCCGCTG CCCAAGGGCC GAGTCTCAGC AACGAGGGCG
TTGTTGTTCG CGGCACTCTT AGGCAGCCTA GGTTTTGTGA TCCTCTATGT TTTTACTAAT
CCGCTCACCG CTTGGCTGAC CTTTGCCAGC TTGATTGGTT ACGCCTTGAT TTATACCGCC
TATTTAAAGC GGGCCACGCC ACAAAACATT GTCATTGGCG GTTTAGCGGG CGCAATGCCG
CCGCTCTTGG GCTGGACGGC GGTGACGAAT CAATTCCATG GTCATGCGCT ATTGCTCGTC
ATCATCATAT TCCTGTGGAC GCCGCCGCAT TTTTGGGCGC TGGCGATTCA CAGACGCGCA
GAATATGCCA AAGTGGATAT TCCCATGCTG CCCGTGACCC ATGGGGTAGA ATTTACTAAG
ACCTGTATCT TGCTCTATAC GATTTTACTG GCGATAGCTT GTCTATTGCC CGTGTTAGTC
GGGATGAGTG GACCGCTCTA CTTTGTGTGC TCAAGCTTGC TCAGCACGGG ATTTATTTAT
AAAGCGTGGC AATTAAAGTA TCAGGATTGC GAAGGGCTGG CGATGCAGGT ATTTCGTTTT
TCGATTTATC ATTTAATGTT GTTATTCATG GCATTACTGC TCGACCACTA TCTTTGGGCT
TAA
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| Protein sequence | MAKPLSISSH PSIHLAWRAY FEMTKPKVVA LMLLTVLVGM CLAMPTILPV KPLVAGLLGI
AMMAGSAAAL NHLIDRRIDG MMARTYNRPL PKGRVSATRA LLFAALLGSL GFVILYVFTN
PLTAWLTFAS LIGYALIYTA YLKRATPQNI VIGGLAGAMP PLLGWTAVTN QFHGHALLLV
IIIFLWTPPH FWALAIHRRA EYAKVDIPML PVTHGVEFTK TCILLYTILL AIACLLPVLV
GMSGPLYFVC SSLLSTGFIY KAWQLKYQDC EGLAMQVFRF SIYHLMLLFM ALLLDHYLWA
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