Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3860 |
Symbol | |
ID | 4254804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4583174 |
End bp | 4584430 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124549 |
Product | aromatic amino acid transporter |
Protein accession | YP_739894 |
Protein GI | 114049344 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAACC ATATGAATGC GGCGAAGAAT AAGCCGGTGG GCAAGTCTTT GCTCGGTGGT GCCATGATTA TTGCCGGTAC CACAGTCGGG GCGGGGATGT TTTCTTTGCC TGTTGTGGGC GCTGGCATGT GGTTTGGCTA CTCGGTACTG ATGTTACTCG GTATTTGGTT CTGCATGTTG ATGTCGGGAT TGTTATTGCT TGAAACCAAC TTGCATTTCG AGCCGGGAGC AAGTTTCGAT ACCCTGACCA AGGAAACCCT AGGCCAGTTT TGGCGGATCG TGAATGGGGT ATCGATTGCC TTCGTGCTTT ACATCTTAAC CTACGCCTAC ATCAGTGGCG GCGGCTCGAT TGTTAACCAT AGCCTACAGG GTATGGGGAT TGAGTTACCC CAGAGTGTTG CTGGATTAGT ATTTGCGGTT GTGCTGGCTT GTATCGTGTT GATCAGCACC AAGGCGGTGG ACCGTATTAC GACCATAATG CTCGGCGGGA TGATCATCAC TTTCTTCCTC GCAATTGGTA ACTTACTGAT CGACATCGAT GTGACTAAAT TGCTCGAACC GGATGGCAAT CAAAGCTTTA TGCCTTATCT GTGGGCTGCT TTGCCCTTCG GCTTGGCAAG TTTTGGCTAC CATGGCAACG TGCCGAGTCT GGTGAAGTAC TATGGCAAAG ATTCATCGAC CATCATCAAA GCGATTTTCG TCGGCACTTT CATCGCGCTG ATCATTTATG CCTGCTGGTT AGTGGCCACT ATGGGCAACA TTCCCCGCAG CCAATTTAGT GAGATTATTG CCCAGGGTGG CAATATGGGG GTGTTAGTCG GCGCCTTGTC GAAAGTGATG GAAAGTAGCT GGTTAAACAG CATGTTAACT CTATTTGCTA ACTTAGCTGT GGCGTCTTCT TTCCTTGGCG TGACCTTAGG CTTATTCGAT TATTTGGCCG ATTTATTCGG GTTCGACGAT ACGCGCTCAG GGCGGATGAA AACGGCAATC GTCACCTTTG TGCCGCCGAC CATATTAGGT TTGCTGTTCC CCGATGGCTT TTTGGTTGCC ATTGGTTTCG CAGCCTTAGC GGCAACCGTT TGGGCCGTGA TTGTCCCTGC ACTGATGGCC TATAAATCGA GACAACAGTT CCCTAATCAT CAAGGTTTTA GAGTCTTCGG CGGTACGCCG TTGATTATCT TGGTGGTGCT ATATGGCGTG GTGACAGGGG CTTGTCATTT ACTCGCGATG GCGAATTTAT TGCCGCAGTT TTCCTAA
|
Protein sequence | MANHMNAAKN KPVGKSLLGG AMIIAGTTVG AGMFSLPVVG AGMWFGYSVL MLLGIWFCML MSGLLLLETN LHFEPGASFD TLTKETLGQF WRIVNGVSIA FVLYILTYAY ISGGGSIVNH SLQGMGIELP QSVAGLVFAV VLACIVLIST KAVDRITTIM LGGMIITFFL AIGNLLIDID VTKLLEPDGN QSFMPYLWAA LPFGLASFGY HGNVPSLVKY YGKDSSTIIK AIFVGTFIAL IIYACWLVAT MGNIPRSQFS EIIAQGGNMG VLVGALSKVM ESSWLNSMLT LFANLAVASS FLGVTLGLFD YLADLFGFDD TRSGRMKTAI VTFVPPTILG LLFPDGFLVA IGFAALAATV WAVIVPALMA YKSRQQFPNH QGFRVFGGTP LIILVVLYGV VTGACHLLAM ANLLPQFS
|
| |