| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3840 |
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| Symbol | |
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| ID | 4256827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4560112 |
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| End bp | 4561833 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124529 |
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| Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
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| Protein accession | YP_739874 |
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| Protein GI | 114049324 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACCG AAAACACAGC CACACTTAAC CTAATGTGGG GCGCATTGAT TCTGGAAGAA
TTAGCACGTC TCGGTGTGCA GCATGTCTGC ATGGCACCGG GCTCACGCTC GACACCGCTA
ACCTTAGCCG CGGCTCAGCA AACCAAGCTT AAACGTCACT TGCATTTCGA TGAGCGTGGC
TTAGGTTTTA TGGCCCTCGG ATTAGCCAAA GCCAGCGGCG CTCCCGTGGC GATTATCACC
ACCTCAGGCA CGGCCGTCGC CAACCTTTAT CCTGCGATAG TCGAAGCTTG GTTGACCCAT
GTGCCCTTGA TTGTCTTAAG CGGTGACAGG CCACCAGAGT TACTCGGTTG CGGCGCCAAC
CAAGCCATAG TGCAACCGGC GATTTTTGCC AATTATGCCC AGCAGGTAAA TCTGCCCACG
CCAGATGCGC ACATTGCACC GCAGATGTTG CTCACAACGC TCGATGAAGC GGTGGCAAAC
CAAACACGCC CAGTGCACAT CAACTGCATG TACCGCGAAC CTCTATATCC GAGTGAGATG
AGTGGCACCA TTCTCGATAG CGAATCACCT TATCTGAGGC CACTGCAAAC TTGGCTGCAA
CACGCCAGAC CCTACACTCA ATACGGTAAG AGTGAACAGC TCAGCAGCCC GAGCGATGAT
GCCATTATGC GTTTCGTCCA TGGTAAGGGC GTCATCATCG CGGGTACGCT CACGCCGGAG
CAAGATCCAC AGCAACTCAT CGCCCTCGCA CAAAAGATTG GTTGGCCATT GCTGACCGAT
GCGCAGTCAC AACTGCGGCA ACATCCCGCG GCGATAGGCA ATATTGACCA ACTACTGCAA
CATCCTAAGG CGCGCAATCT GTTGCAAGAG GCTGACCGCG TGCTGGTATT TGGTGGGCGC
TTATTGTCTA AGCGTTTGAT TGCTTACCTT GCCGAGCAAA ACTGGCACAG TTACTGGCAA
GTGCTGCCAC AGCAGGACAG ACTCGACCCA AGCCATAATG CCAAACACAT TTGGCACGCC
AACGCAGCGC AATTTGCTCA ACTTAATTGG TATCGTTCCT CTTCGGCCAA TTGGGCCAAT
ACCTTAGTTA CCTACAACGA TGAATTACAT AGTTTATTTG TGCGTAATAT CGATCAAGGT
GAGTTTGGTG AGGCGCAGGT TATCCGCGCC ATTGCCAATA CGCGGCCGTT AGAGCAGCAA
TTGTTTATCG GCAATAGTCT GCCCGTGCGG TTATACGATA TGTACGCCCC AGTAAGTTGT
TGCACGGCCA CCACTTATAC CAACCGCGGC GCATCGGGGA TCGACGGCTT ACTGGCCACC
GCCTGCGGCA TTGCCGCGCA TCAAGGTAAA CCCACGAGCT TGATTATTGG GGACTTATCC
CAGCTGCATG ATCTCAACTC TTTTACCATT GCCCGCAGCT TAACCAGCCC GCTGGTGATC
ATTATTCTCA ACAACGACGG CGGCAATATC TTTAATCTCT TGCCCGTTCC CAACGAGGAG
CTGCGCAGTG ATTACTACCG CTTAAGCCAT GGTTTAGAGT TTGGTTACGC CGCTGCAATG
TTTAATCTGC CATATAATCA AGTGGATAAT TTAGCCGACT TCCAAAGCTG TTATCACGAA
GCGCTGGATT ATCAGGGCGC CTCGGTGATC GAAGTCAGTG TAAGCCAACA CCAAGCCAGC
GAGCAGATCG CCGCGCTGAA TTTATGGGTG AAACAAAGCT AA
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| Protein sequence | MRTENTATLN LMWGALILEE LARLGVQHVC MAPGSRSTPL TLAAAQQTKL KRHLHFDERG
LGFMALGLAK ASGAPVAIIT TSGTAVANLY PAIVEAWLTH VPLIVLSGDR PPELLGCGAN
QAIVQPAIFA NYAQQVNLPT PDAHIAPQML LTTLDEAVAN QTRPVHINCM YREPLYPSEM
SGTILDSESP YLRPLQTWLQ HARPYTQYGK SEQLSSPSDD AIMRFVHGKG VIIAGTLTPE
QDPQQLIALA QKIGWPLLTD AQSQLRQHPA AIGNIDQLLQ HPKARNLLQE ADRVLVFGGR
LLSKRLIAYL AEQNWHSYWQ VLPQQDRLDP SHNAKHIWHA NAAQFAQLNW YRSSSANWAN
TLVTYNDELH SLFVRNIDQG EFGEAQVIRA IANTRPLEQQ LFIGNSLPVR LYDMYAPVSC
CTATTYTNRG ASGIDGLLAT ACGIAAHQGK PTSLIIGDLS QLHDLNSFTI ARSLTSPLVI
IILNNDGGNI FNLLPVPNEE LRSDYYRLSH GLEFGYAAAM FNLPYNQVDN LADFQSCYHE
ALDYQGASVI EVSVSQHQAS EQIAALNLWV KQS
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