| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3824 |
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| Symbol | |
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| ID | 4256811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4544407 |
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| End bp | 4545366 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124513 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_739858 |
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| Protein GI | 114049308 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG ACAACTTAGC CAGAATCGAT CTCAACCTAC TGGTGATATT GAAGGTTTTG
CTCGAAGAGC AGAGCGTCAC CCGCGCAGCG AGTCGATTAC ATATTAGCCA GTCGGCATTG
AGCAAGAGCT TGAATCGCCT GCGAGAAACT CTAGATGATC CCCTGTTCCA GCGCACTGCC
CACGGGCTTA AACCCACGGC CCATGCACTC AATATCGGGC AGAAATTGCC GAATATTTTG
CAGGACTTAT ATCAACTCAC TCAACCACCG ACGTTTACGC CGGCCAGCAG TAACAGGCAG
TTTTCCTTTG CCATGGTTGA AAGCGCCTAC GAAACCTTAA TTCCATATTT TATCGGCCCA
TTGTTAAGCA CTGCACCGAA TCTGAAGCTC GACTCCTATG TGTGGACCGA GAAATCGATG
CACGATTTAC AGCAAGGGCA AATTGACTTT GGGATCTCGG GGCGGGATCT ACACCCACTG
TCAGACTCGC AAACGGACAG GCTCCCAGAT GGCATCAGCT GCCAAACCCT GTTTACCGAC
CGGCAAGTAT GCTTGGTGCG CCAAGATCAT CCTTTGATGA CCGCACTCAC CTCGCCCCAA
TGGGATTTAT CCCTGTACTT GGATATGGCG CATGTGCAGG TTCGCTGTGA AGGGAGTGAT
TGGTGGGCGC TGGATTACTT TCTGGCCGAC CTTGGCCACA GGCGCAAAAT CAGCACAACT
GTGCCCGATT TTTATGGCGC GGCCAGCATC TGTGCACACA GTGATTTAAT TTTCACTTTG
CCTTCGAGCT TTGCCCTGCA CGCATGCAAG CTGTATCCAC TAAGGCTATT GCCTCTGCCC
TTTGAATTTA TCCCTATGGC CTATGTGCTG CTCTGGCATC AGCGCAACGA TGAAGACCAA
GGCCATAAAT GGATGCGTGA TACCATCTGC CAAAGTGTTG AAAAGCTTAT GCAACCCTAG
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| Protein sequence | MNLDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRET LDDPLFQRTA
HGLKPTAHAL NIGQKLPNIL QDLYQLTQPP TFTPASSNRQ FSFAMVESAY ETLIPYFIGP
LLSTAPNLKL DSYVWTEKSM HDLQQGQIDF GISGRDLHPL SDSQTDRLPD GISCQTLFTD
RQVCLVRQDH PLMTALTSPQ WDLSLYLDMA HVQVRCEGSD WWALDYFLAD LGHRRKISTT
VPDFYGAASI CAHSDLIFTL PSSFALHACK LYPLRLLPLP FEFIPMAYVL LWHQRNDEDQ
GHKWMRDTIC QSVEKLMQP
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