Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3781 |
Symbol | |
ID | 4255365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4488953 |
End bp | 4489615 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124468 |
Product | two component transcriptional regulator |
Protein accession | YP_739817 |
Protein GI | 114049267 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTAC TCCTAATTGA AGATGATACT GACTTAGTGG CTCGCCTCAT TCCCGCCCTT AACAAGGCGG GCTACACGGT TGAACATGCC AATAATGGTA TCGATGGCGC TTTTCTGGGT GAGGAAGAAG CCTTCGAGGC GGTGATCCTC GATTTAGGCT TGCCCGGAAA GCCGGGCTTA AGTGTACTGA GCCAATGGCG CCAAAAGGGT CTGCTGATGC CAGTGTTAAT TCTTACGGCT CGCGATGCTT GGCACGAACG CGTCGATGGC CTCAAGGCCG GCGCCGATGA TTATCTCGGT AAACCTTTCC ATGTTGAGGA GCTGCTCGCC AGATTAGAAG CGCTGATCCG CCGCCACTTT GGCCGCGCCG ATAATCTGCT GCAACATGCG GGCGTCTCCC TCGATGTGGA TAAACAAGCG GTGACCAATG CCGAAGGAGA TGTTATCGAG CTGACTAAGA TTGAGTATCG CCTGCTGCAT TATTTAATGG CCAACCCGAC TAAGATTGTC TCCAAATCTG AGTTGAGTGA GCGCATTTAC GAAGAGGAAC AAATCAAAGA CAGCAATGTG ATTGAAGTGT ACGTCAACCG ACTCCGCCAA CGCCTAGGTA AAGACTATAT CGAGACGCGG CGCGGCCAAG GTTATCGACT CAAGGATGCA TAA
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Protein sequence | MRLLLIEDDT DLVARLIPAL NKAGYTVEHA NNGIDGAFLG EEEAFEAVIL DLGLPGKPGL SVLSQWRQKG LLMPVLILTA RDAWHERVDG LKAGADDYLG KPFHVEELLA RLEALIRRHF GRADNLLQHA GVSLDVDKQA VTNAEGDVIE LTKIEYRLLH YLMANPTKIV SKSELSERIY EEEQIKDSNV IEVYVNRLRQ RLGKDYIETR RGQGYRLKDA
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