Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3757 |
Symbol | |
ID | 4257620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4464826 |
End bp | 4466925 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638124445 |
Product | hypothetical protein |
Protein accession | YP_739794 |
Protein GI | 114049244 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.62382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTTT TGCAAACACT CAAACTTACG GGTGAGAATG AGGCGCTGAA ACGTCAAGAG CTTAAACAAT ACTTCAATCA AACTTGGGCA CTCTATGAAT CCCTCTTCGA GTTGATAAAG CACGACGAGG CTTATTACGT TAAAGCCGAA CCGCTGCGCC ATCCGCTGAT TTTTTACTTT GGCCATACCG CCACTTTCTA TATCAATAAA CTCAAGCTGG GTAAGTATCT CGATGAACGA GTGAATGATC ACTTTGAATC TATGTTTGCC ATCGGTGTGG ACGAAATGTC TTGGGATGAC CTCGATGAAA CCCACTATCA ATGGCCAAGT GTCGCAGAGG TAAAGACTTA TCGGGATCAC GTCAAACAGG TCGTCAATCA ACTGATTGAT ACCATGCCAA TCACTCTGCC GATCAGCCAG GACAGTCCCG CTTGGGTCAT ATTGATGGGC ATAGAACACG AGCACATTCA CTTAGAGACC TCTTCCGCCA TTATTCGCCA GCTTCCATTA GAGGATGTGA GTGCCAATGC CCAGTGGCCA GAATGTCAGG ATGTTGGTAG CGCCGAACCC AATCAGCTGC TTGCCGTGGC GGGTAAAAAA ATCACCTTAG GCAAAAAAGA GCAAGACAAC ACCTATGGCT GGGATAACGA ATACGGTAAT AAGAGTTTTA AAGTCGCCGA CTTTAAAGCC TCAAAGTACT TAGTGAGCAA TCAAGAATAC CTAGCCTTTG TCGAAGCGGG AGGCTATCAA ACTCAAGACT ATTGGAATGA GGAAGGCCAA GCTTGGTTGG CGTATACCCA AGCCCAAATG CCGCGCTTTT GGCGTCGCCG CGATGATAAA TGGTGGCAAC GTAACCTCAC TAGCGAAATC CCTTTGCCGC TCAATTGGCC CGTCGAAGTC AATCAACTCG AAGCTAAAGC CTTTTGTAAT TGGAAGGCGC GCCAAAGCCA GAGCAATATT CGCCTGCTCA CCGAAGCCGA GTGGTATATC TTGCGGGAAA ATGTACCGAG CGATGCTCCC GATTGGCATG AAGTTCCAGG CAATATCTCG CTGGCTTATT ACGCCTCTTC CTGCCCGGTG AACCGCTTTA AACACAATGA TTTTTATGAC ATTGTCGGCA ATGTCTGGCA ATGGACTGAA ACCGCTATCG ACGGTTTTAA TGGTTTTGCC GTACATCCGC TCTATGATGA TTTTTCGACG CCCACCTTCG ATGGCAAGCA CAATCTGATT AAGGGCGGCT CGTGGATTTC AACGGGCAAT GAAGCCATTG CCGCCTCACG CTACGCCTTT AGGCGTCACT TTTATCAACA TGCCGGATTC CGTTACGTCG AGTCGTTGCA AAATCCAGAG CAAATGGCCG AGGTCAATGT GTACGAAACC GATGAACTGA TTTCCCAGTA TTTAGAATTC CACTATGGTG CCGAGTACTT TGGTGTGCCG AATTTTTGCG TAAATGGGGT ACAACAAGCA CTCAACGAGA TCCAACTTGA GCACACCACC AAAGCCTTAG ATATAGGTTG CTCAGTCGGA CGCGCTAGTT TTGAGTTAGC CAAAGTGTTC GACCACGTGG ATGGCATCGA CTTTTCGGCG CGCTTTATCC AGCAAGCTTA CGCCCTGACC GAGCAAGGTG AAAAACGCTA CACCATTCGC ACCGAGGGAG ACTTACAGGA ATTCAAGAGC GCCAGCCTTG CTAAACTGGG ATACCTTGGC GAAGCCAAAA AAGTCAATTT TATCCAAGGG GATGCCTGTA ATCTCAAACC AATCTACACA GGATACGATT TGGTCTATGC CTCAAATCTA ATCGATAGAT TGAACGACCC TCAACATTTC CTCACCAGTA TTGGGCAACG CATCAACCAA GGAGGATATC TAGTTATCGC CTCGCCCTAT ACCTGGCTCG AAGACTACAC ACCAAAGGAT AAATGGCTCG GGGGGATTAA AGTCAAAGGG GAAAACTTCA CTACTTTAGA TGGGCTAACC GAAACCTTGA TAGGCCAATT TGAACTGGTC GCGGTAAAAG AAATCCCCTT CGTTATCCGT GAAACCAAGC GTAAATTCCA GCATTCGATT TCAGAGATGA CGATCTGGCG TAAGCGTTAG
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Protein sequence | MPVLQTLKLT GENEALKRQE LKQYFNQTWA LYESLFELIK HDEAYYVKAE PLRHPLIFYF GHTATFYINK LKLGKYLDER VNDHFESMFA IGVDEMSWDD LDETHYQWPS VAEVKTYRDH VKQVVNQLID TMPITLPISQ DSPAWVILMG IEHEHIHLET SSAIIRQLPL EDVSANAQWP ECQDVGSAEP NQLLAVAGKK ITLGKKEQDN TYGWDNEYGN KSFKVADFKA SKYLVSNQEY LAFVEAGGYQ TQDYWNEEGQ AWLAYTQAQM PRFWRRRDDK WWQRNLTSEI PLPLNWPVEV NQLEAKAFCN WKARQSQSNI RLLTEAEWYI LRENVPSDAP DWHEVPGNIS LAYYASSCPV NRFKHNDFYD IVGNVWQWTE TAIDGFNGFA VHPLYDDFST PTFDGKHNLI KGGSWISTGN EAIAASRYAF RRHFYQHAGF RYVESLQNPE QMAEVNVYET DELISQYLEF HYGAEYFGVP NFCVNGVQQA LNEIQLEHTT KALDIGCSVG RASFELAKVF DHVDGIDFSA RFIQQAYALT EQGEKRYTIR TEGDLQEFKS ASLAKLGYLG EAKKVNFIQG DACNLKPIYT GYDLVYASNL IDRLNDPQHF LTSIGQRINQ GGYLVIASPY TWLEDYTPKD KWLGGIKVKG ENFTTLDGLT ETLIGQFELV AVKEIPFVIR ETKRKFQHSI SEMTIWRKR
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