Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3726 |
Symbol | |
ID | 4254866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4435744 |
End bp | 4437087 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124414 |
Product | anaerobic C4-dicarboxylate transporter |
Protein accession | YP_739763 |
Protein GI | 114049213 |
COG category | [R] General function prediction only |
COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00035323 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTTTAA TGGAGTTTAT TGTCGTACTC GGCTGTCTAC TGCTCGGTAC TCGCTATGGT GGTATGGGGC TAGGACTGAT AAGTGGTATT GGCTTATTTT TACTGACGTT TGTGTTTGGT CTCGCCCCAG GACAACCGCC CGTACAGGTG ATGCTCACCA TTCTTGCGGT GATCGGCTGT GCCTCGGTGT TACAAACCGC AGGTGGTTTA AATGTGATGA TGCAATTTGC CGAGCGTTTA CTGCGCCGCC ATCCACAGTA CATCACCATT CTGGCGCCGC TCACCACTTG GACCTTAACC TTTTTATGCG GAACCGGCCA CGTGGTTTAC ACCATGTTCC CGATCATCTC CGATATCGCC CTGAAGAAAA ACATTCGTCC AGAACGCCCC ATGGCGGTGG CATCTGTTGC CTCACAAATG GCGATCTGCG CCTCTCCGGT ATCGGTCGCC GTGGTTTCTA TGGTATCGAT TTTGGCGGCG CAGCATGGTG TCGGCCATGC CTACAGCATG CTGGAAATTT TAATGGTGTC TGTACCAGCT TCTCTTTGCG GCGTATTAGT GGCCGCACTC TGGAGCCTGC GTCGTGGTAA AGATTTAGAT AAGGACGAAG AGTTTCAGGC GCGGATTAAA GATCCCGAAC AAAGGGCGTT TATCTACGAC AAGAGCGAGA CTCTACTGGA TCAAACCTTT CCTAAAGAAG CCTATTGGGC GACGGGGATT TTCTTCACCG CTATCGCCGC CGTGGTGTTA CTTGGCTCCT TTAGCGAATT GCGACCAGTG TTTGAGGCGA AGGGCAAGCT GGCGCCACTA TCGATGAACT TAGTGATCCA GATGATGATG TTGATCGCTG GCGCTTTTAT CTTAATGAGC TGCAAGGTCA AACCCACAGA AATTGCTAAC GGCCCAGTGT TTAAGGCCGG CATGGTAGCG ATTTTCTCAG TATTTGGCGT GGCTTGGATG AGTGATACTT ACTTTATCAG CCATATGGAT GCACTGAAGG AAAATCTCTC CCATGTGGTG CAAAACCAAC CTTGGACCTA TGCCTTAGTG CTGTTTTTAA TCTCAAAACT GGTCAACAGC CAAGCGGCGG CGCTCACGGC TATCGCGCCC ATGGGCTTAG CCTTAGGCGT CGATCCTAAG TTGTTGATTG CCTTTTTACC CGCGAGCTAT GGTTACTTTG TGCTACCCAC TTATCCAAGC GATTTGGCCT GTATCGGCTT CGACCGAACA GGGACCACCA AAATTGGTAA GTTCATCATT AACCACAGCT TTATTATTCC AGGATTGATA GGCGTGGGCA CGGCATCAAC CGTCGGTTAT CTGCTGGCAA CCACCTTACT GTAA
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Protein sequence | MILMEFIVVL GCLLLGTRYG GMGLGLISGI GLFLLTFVFG LAPGQPPVQV MLTILAVIGC ASVLQTAGGL NVMMQFAERL LRRHPQYITI LAPLTTWTLT FLCGTGHVVY TMFPIISDIA LKKNIRPERP MAVASVASQM AICASPVSVA VVSMVSILAA QHGVGHAYSM LEILMVSVPA SLCGVLVAAL WSLRRGKDLD KDEEFQARIK DPEQRAFIYD KSETLLDQTF PKEAYWATGI FFTAIAAVVL LGSFSELRPV FEAKGKLAPL SMNLVIQMMM LIAGAFILMS CKVKPTEIAN GPVFKAGMVA IFSVFGVAWM SDTYFISHMD ALKENLSHVV QNQPWTYALV LFLISKLVNS QAAALTAIAP MGLALGVDPK LLIAFLPASY GYFVLPTYPS DLACIGFDRT GTTKIGKFII NHSFIIPGLI GVGTASTVGY LLATTLL
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