Gene Shewmr7_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3726 
Symbol 
ID4254866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4435744 
End bp4437087 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content50% 
IMG OID638124414 
Productanaerobic C4-dicarboxylate transporter 
Protein accessionYP_739763 
Protein GI114049213 
COG category[R] General function prediction only 
COG ID[COG2704] Anaerobic C4-dicarboxylate transporter 
TIGRFAM ID[TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00035323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTTAA TGGAGTTTAT TGTCGTACTC GGCTGTCTAC TGCTCGGTAC TCGCTATGGT 
GGTATGGGGC TAGGACTGAT AAGTGGTATT GGCTTATTTT TACTGACGTT TGTGTTTGGT
CTCGCCCCAG GACAACCGCC CGTACAGGTG ATGCTCACCA TTCTTGCGGT GATCGGCTGT
GCCTCGGTGT TACAAACCGC AGGTGGTTTA AATGTGATGA TGCAATTTGC CGAGCGTTTA
CTGCGCCGCC ATCCACAGTA CATCACCATT CTGGCGCCGC TCACCACTTG GACCTTAACC
TTTTTATGCG GAACCGGCCA CGTGGTTTAC ACCATGTTCC CGATCATCTC CGATATCGCC
CTGAAGAAAA ACATTCGTCC AGAACGCCCC ATGGCGGTGG CATCTGTTGC CTCACAAATG
GCGATCTGCG CCTCTCCGGT ATCGGTCGCC GTGGTTTCTA TGGTATCGAT TTTGGCGGCG
CAGCATGGTG TCGGCCATGC CTACAGCATG CTGGAAATTT TAATGGTGTC TGTACCAGCT
TCTCTTTGCG GCGTATTAGT GGCCGCACTC TGGAGCCTGC GTCGTGGTAA AGATTTAGAT
AAGGACGAAG AGTTTCAGGC GCGGATTAAA GATCCCGAAC AAAGGGCGTT TATCTACGAC
AAGAGCGAGA CTCTACTGGA TCAAACCTTT CCTAAAGAAG CCTATTGGGC GACGGGGATT
TTCTTCACCG CTATCGCCGC CGTGGTGTTA CTTGGCTCCT TTAGCGAATT GCGACCAGTG
TTTGAGGCGA AGGGCAAGCT GGCGCCACTA TCGATGAACT TAGTGATCCA GATGATGATG
TTGATCGCTG GCGCTTTTAT CTTAATGAGC TGCAAGGTCA AACCCACAGA AATTGCTAAC
GGCCCAGTGT TTAAGGCCGG CATGGTAGCG ATTTTCTCAG TATTTGGCGT GGCTTGGATG
AGTGATACTT ACTTTATCAG CCATATGGAT GCACTGAAGG AAAATCTCTC CCATGTGGTG
CAAAACCAAC CTTGGACCTA TGCCTTAGTG CTGTTTTTAA TCTCAAAACT GGTCAACAGC
CAAGCGGCGG CGCTCACGGC TATCGCGCCC ATGGGCTTAG CCTTAGGCGT CGATCCTAAG
TTGTTGATTG CCTTTTTACC CGCGAGCTAT GGTTACTTTG TGCTACCCAC TTATCCAAGC
GATTTGGCCT GTATCGGCTT CGACCGAACA GGGACCACCA AAATTGGTAA GTTCATCATT
AACCACAGCT TTATTATTCC AGGATTGATA GGCGTGGGCA CGGCATCAAC CGTCGGTTAT
CTGCTGGCAA CCACCTTACT GTAA
 
Protein sequence
MILMEFIVVL GCLLLGTRYG GMGLGLISGI GLFLLTFVFG LAPGQPPVQV MLTILAVIGC 
ASVLQTAGGL NVMMQFAERL LRRHPQYITI LAPLTTWTLT FLCGTGHVVY TMFPIISDIA
LKKNIRPERP MAVASVASQM AICASPVSVA VVSMVSILAA QHGVGHAYSM LEILMVSVPA
SLCGVLVAAL WSLRRGKDLD KDEEFQARIK DPEQRAFIYD KSETLLDQTF PKEAYWATGI
FFTAIAAVVL LGSFSELRPV FEAKGKLAPL SMNLVIQMMM LIAGAFILMS CKVKPTEIAN
GPVFKAGMVA IFSVFGVAWM SDTYFISHMD ALKENLSHVV QNQPWTYALV LFLISKLVNS
QAAALTAIAP MGLALGVDPK LLIAFLPASY GYFVLPTYPS DLACIGFDRT GTTKIGKFII
NHSFIIPGLI GVGTASTVGY LLATTLL