Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3683 |
Symbol | |
ID | 4254893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4385000 |
End bp | 4385434 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124371 |
Product | thioesterase superfamily protein |
Protein accession | YP_739720 |
Protein GI | 114049170 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCT TGCTCAGCAT AGAAATGGAC ATGCAGATCC CCTTCCACGA TGTGGATTCG ATGGGGATCA CTTGGCATGG TAATTACCTG CGTTATTTCG AGATTGCCCG CTGCAAATTA CTCGACGAGT TAGGCTACAA CTATCGCCAA ATGCAGGCCT CGAACTACGC TTGGCCGATT ATTGATTTGC AGATCAAATA CGTTAAGGCC AGCACCTTCG AGCAAAACAT TACCGTGCGC GCCGAGTTGG TCGAGTGGGA AAATCGTCTA AAAATCAATT ATCAAATCCG TGATACGGCA ACCGGTGAGC GTATTACCAA GGGCTATACC ATTCAGGCGG CGGTGGATAT GACGAGCCAA GAAATGTGCT TTGTGACGCC AGAGGTGTTT CGCAGCAAAA TCGCCCCGCT GCTGGCAAAG GCGGATAGCG AATGA
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Protein sequence | MKALLSIEMD MQIPFHDVDS MGITWHGNYL RYFEIARCKL LDELGYNYRQ MQASNYAWPI IDLQIKYVKA STFEQNITVR AELVEWENRL KINYQIRDTA TGERITKGYT IQAAVDMTSQ EMCFVTPEVF RSKIAPLLAK ADSE
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