| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3672 |
|---|
| Symbol | |
|---|
| ID | 4254882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4373736 |
|---|
| End bp | 4375826 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638124360 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_739709 |
|---|
| Protein GI | 114049159 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0149204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCTA ACGACTTGCA GCAATTGGAT CTTGTTCCGA TCACCGACCT CAAAGGCGTC
GCCAAAAGGG TGGCGGAAAA ACTCGCAAAG CTCGGCATCA CAACAGTACA AGATCTGCTG
TTTCACTTAC CCCTGCGCTA CGAAGACCGC ACTCAGATTT ATCCTATTGC CGCCTTAATG
CCGGGAAATT ACGGCACCAT TGAAGCCGAA ATCCAGTCGA CACAAATCAT TCAAGGCCGC
AAACGCATGC TGGTGTGCAA TGTGCGGGAT AATACTGGCA GCATGAGCCT ACGCTTCTTT
AACTTTTCGA TGGCGCAACG CAATGCGATG CAAAATGGCT TAATGATCCG CGCCTACGGT
GAAATTCGCC GTGGCAATCA TCAGGCTGAA ATCGTCCATC CCGAATACAA AATTGTGTAT
CCCGGTGAAG ATATTCATTT AAGCGATACC CTTACGCCGA TTTATCCCAC TACGGAAGGA
CTCAAACAGG CGAGTTGGAT CAAGCTCACC GAGCAAGCCC TCGAATTATT AGAAGACGGC
GGTTTGACCG AGTTATTACC CGCCAATTTG CAGCCCAACA GCATGAGCCT GAAACAAGCA
CTGCAAACCC TACATCGCCC CCACGCGGGA ATATCACAAT TTGACTTAGA GCTCGGCCAG
CATCCGGCGC AGCAACGGCT GGTGCAGGAA GAACTGCTCG CCCATAACCT CAGCATGCTC
CGCCTCAGGC AGCGCAGTAA TCTCGACGCA GCCGTAACCA TGCACGCCAG CGGCCAACTA
TTGAATCCCT TTCTCACCTC ATTGCCCTTT AAACCGACGG GCGCCCAGGA AAGAGTCGTC
GCCGAGATTG GTAAAGACTT AGAGCAACCG CACCCCATGA TGCGTTTAGT TCAAGGTGAT
GTGGGTTCGG GTAAAACCTT AGTCGCCGCC CTCGCCGCCT TGCAAGCCAT CGAAAATGGT
TACCAAGTGG CCATGATGGC GCCTACCGAA TTACTCGCCG AGCAGCATGC GGCTAACTTT
GCCGCCTGGT TTGAACCCTT GGGATTAAAA GTCGGATGGC TGGCGGGCAA ACTTAAAGGC
AAGGCGCGGG CGCAATCCTT AGCCGATATT GAATCGGGCG ATGCACAAAT GGTGATAGGC
ACCCATGCTA TCTTCCAGCA GCAGGTCACT TTCAACAAAC TGGCCTTGAT CATTATTGAT
GAGCAGCACA GGTTCGGGGT TCACCAACGG ATGGGACTCA GGGAAAAAGG CATTAACCAA
GGCTTTCATC CCCATCAGTT AATTATGACG GCAACGCCCA TCCCACGCAC CTTAGCCATG
ACGGCCTACG CCGATTTGGA CACCTCGATT ATCGATGAGT TGCCGCCCGG CCGCACACCT
GTGACCACAG TCGCCATCCC CGATTCGCGT CGCAATGAAG TGCTCGAGCG CGTCCGTAAC
AGCGTAGTCA CGGATAAACG CCAAGCCTAT TGGGTCTGTA CTCTGATTGA AGAATCTGAA
GTTCTCGAGT GCCAAGCGGC GGAAGATACC GCCGAAGAGT TACGCCAAGC GCTGCCGGAA
CTGAGCATAG GTTTAGTCCA CGGCCGGATG AAAAGTGCTG AAAAGCAAAA AATTATGGCC
GACTTCAAGG CGGGAACTAT CCATTTATTG GTGGCAACCA CAGTGATTGA AGTCGGTGTC
GACGTACCCA ACTCCAGCTT AATGATTATC GAAAACCCAG AGCGGCTTGG CCTAGCACAG
CTGCACCAAC TGCGGGGCCG CGTAGGGCGC GGTGCCGTGG CGAGCCATTG TGTGTTACTC
TACAAAGCGC CATTGAGCCA AACCGCAAGC CAGCGGTTGA ATGTGCTCAG GCAAAGTAAT
GATGGTTTTG TGATTGCACA GAAAGACTTA GAGATCCGTG GGCCGGGCGA AGTACTAGGC
ACTAAGCAAA CGGGACTGGC CGAGCTGAAA ATCGCCGACC TTGTCCGCGA TCAGGCGCTC
ATCCCACATA TCCAAAAACT GGCGAGCCAT GTGATGTCAC AGGCACCAGA GGCGGTCGAT
GCCATTATTC ATCGCTGGCT TGGACACAGG CAACAATATG TTCAGGCCTA A
|
|---|
| Protein sequence | MSANDLQQLD LVPITDLKGV AKRVAEKLAK LGITTVQDLL FHLPLRYEDR TQIYPIAALM
PGNYGTIEAE IQSTQIIQGR KRMLVCNVRD NTGSMSLRFF NFSMAQRNAM QNGLMIRAYG
EIRRGNHQAE IVHPEYKIVY PGEDIHLSDT LTPIYPTTEG LKQASWIKLT EQALELLEDG
GLTELLPANL QPNSMSLKQA LQTLHRPHAG ISQFDLELGQ HPAQQRLVQE ELLAHNLSML
RLRQRSNLDA AVTMHASGQL LNPFLTSLPF KPTGAQERVV AEIGKDLEQP HPMMRLVQGD
VGSGKTLVAA LAALQAIENG YQVAMMAPTE LLAEQHAANF AAWFEPLGLK VGWLAGKLKG
KARAQSLADI ESGDAQMVIG THAIFQQQVT FNKLALIIID EQHRFGVHQR MGLREKGINQ
GFHPHQLIMT ATPIPRTLAM TAYADLDTSI IDELPPGRTP VTTVAIPDSR RNEVLERVRN
SVVTDKRQAY WVCTLIEESE VLECQAAEDT AEELRQALPE LSIGLVHGRM KSAEKQKIMA
DFKAGTIHLL VATTVIEVGV DVPNSSLMII ENPERLGLAQ LHQLRGRVGR GAVASHCVLL
YKAPLSQTAS QRLNVLRQSN DGFVIAQKDL EIRGPGEVLG TKQTGLAELK IADLVRDQAL
IPHIQKLASH VMSQAPEAVD AIIHRWLGHR QQYVQA
|
|---|
| |