Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3662 |
Symbol | |
ID | 4256160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4360612 |
End bp | 4362471 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638124350 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_739699 |
Protein GI | 114049149 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGT TACGTTCAGC AACCAGTACC GAAGGCCGCA ATATGGCGGG TGCCCGTGCG CTATGGCGCG CCACAGGGGT GAAAGACAAT GATTTTGGTA AGCCGATTAT TGCAATTGCC AACTCCTTTA CTCAGTTTGT TCCCGGCCAT GTGCATTTAA AGGATATGGG TTCTCTGGTG GCGGGCGCCA TCGAAGAGGC GGGCGGTATT GCCAAGGAAT TCAACACCAT CGCCGTCGAT GATGGTATCG CCATGGGCCA CGGTGGCATG CTCTACAGTC TGCCTTCGCG GGAGCTTATC GCCGATAGCG TCGAGTATAT GGTCAATGCC CACTGCGCCG ATGCGCTGGT TTGTATCTCT AACTGCGACA AAATCACCCC CGGCATGTTG ATGGCGGCGC TGCGCCTCAA TATCCCCGTG GTGTTTGTGT CGGGCGGGCC GATGGAGGCG GGTAAAACCA AACTGTCGGA CAAGCTTATC AAACTCGATT TAGTCGATGC CATGGTGGCG GCGGCAGACT CGAGTGTGAG CGATGAAGAT AGCGCTAAAA TCGAACGTAG TGCTTGCCCT ACATGTGGTT CCTGTTCGGG CATGTTTACC GCTAACTCGA TGAACTGTTT AACCGAAGCT TTAGGTCTGT CGCTGCCGGG CAACGGCTCC ATGCTCGCGA CCCATAGCGA TCGCCGCGAA CTGTTTTTAG AAGCAGGCCG GCGCGTAATG GCGCTGACCA AACGTTACTA CGAACAAGAT GATGTCTCGG CACTGCCGCG CAACATCGCC AGCTTTAAAG CCTTTGAGAA CGCCATGGCG CTGGATATCG CCATGGGCGG TTCGTCCAAT ACTGTGTTGC ACTTATTGGC TGCGGCGCAG GAGGCGGACG TGGCATTCAC TATGGACGAT ATCGACCGTA TGTCGCGCCA AGTGCCACAT CTGTGTAAGG TGGCGCCGTC GACCGCTAAA TACCATATGG AAGATGTTCA CCGCGCTGGT GGCGTGATGG GGATCTTAGG CGAGCTAGAC CGCGCCGGAC TGCTGCATAC CGATGTGCCA CATGTTGCCG CCGATGCGGG GGGCAATCTC AAGTCAGTGC TCGCCAAGTA CGATGTCATG CAAACCCAAG ATGACAAAGT AAAACAATTC TTTATGGCGG GGCCTGCGGG CATTCCTACC ACTAAAGCCT TTAGCCAAGA CTGCCGCTGG CCATCGCTGG ACGATGACAG GCGTGAAGGT TGTATCCGTA GCCGCGAATT TGCCTTCAGC CAAGAGGGCG GTTTGGCCGT GTTATCGGGC AATCTGGCCG ACAATGGCTG TATCGTTAAA ACTGCCGGTG TGGATGAGTC TAACCTGACC TTTACTGGCA GCGCTCGGGT GTACGAAAGC CAAGATGACG CTGTCGCTGG CATTTTAGGT GGCGAAGTGG TGGCGGGTGA TGTGGTGGTG ATTCGTTACG AAGGGCCAAA AGGCGGCCCA GGTATGCAAG AAATGTTGTA CCCCACCAGT TACTTAAAAT CCCGTGGCTT AGGCAAGGCC TGCGCGCTGA TCACTGATGG CCGCTTCTCT GGTGGAACTT CCGGTTTATC CATCGGCCAT GTGTCGCCTG AGGCGGCGGC GGGCGGCACG ATTGCCTTGA TTGAAAACGG CGATCGCATC GAAATCGATA TTCCTAAGCG CAGTATCAAG CTTGCTGTGA GTGATGCTGA ATTGGCTGCG CGCCGTGAAA CCATGCTCGC CCGTGGGCCA ATGGCGTGGA AACCGCTTTC GCGTCAGCGT TATGTGTCGA TGGCGCTCAA AGCCTACGCC ATGCTTGCCA CCAGTGCCGA TAAGGGCGCG GTGCGCGATC GCAGTAAGTT GGAGGACTGA
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Protein sequence | MPKLRSATST EGRNMAGARA LWRATGVKDN DFGKPIIAIA NSFTQFVPGH VHLKDMGSLV AGAIEEAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADALVCIS NCDKITPGML MAALRLNIPV VFVSGGPMEA GKTKLSDKLI KLDLVDAMVA AADSSVSDED SAKIERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS MLATHSDRRE LFLEAGRRVM ALTKRYYEQD DVSALPRNIA SFKAFENAMA LDIAMGGSSN TVLHLLAAAQ EADVAFTMDD IDRMSRQVPH LCKVAPSTAK YHMEDVHRAG GVMGILGELD RAGLLHTDVP HVAADAGGNL KSVLAKYDVM QTQDDKVKQF FMAGPAGIPT TKAFSQDCRW PSLDDDRREG CIRSREFAFS QEGGLAVLSG NLADNGCIVK TAGVDESNLT FTGSARVYES QDDAVAGILG GEVVAGDVVV IRYEGPKGGP GMQEMLYPTS YLKSRGLGKA CALITDGRFS GGTSGLSIGH VSPEAAAGGT IALIENGDRI EIDIPKRSIK LAVSDAELAA RRETMLARGP MAWKPLSRQR YVSMALKAYA MLATSADKGA VRDRSKLED
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