Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3646 |
Symbol | |
ID | 4256144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4341507 |
End bp | 4342064 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638124330 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_739683 |
Protein GI | 114049133 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGATA CCGTTAATAT TGAAGAAATG ACTACAACCC AGGCCTATGA TCTGTCCGAT AAAGATGGTG ACGGCGTGAT TGAAGCGCGT GAACGTTGTA ACGATACAGC CAAAGGTGCG GGAACGGATA ATTATGGCTG TGGTAAGATA AAAGCCATCA ATGAGCGCAA GGAAATCAAT GTATTATTTC CAAACGACTC AGCTTATATT GCACCAGAGT ACTATCCACA GATTGAAGAA ATCGCGATGT TTTTACGTCA ATATCCCACG ACTAAAGTGA CCATCGAAGG CCACACTAGC CGCACAGGGA CAGATGAAAG AAACGCCGTA CTTTCTCAAG AACGTGCTGA TGCCGTAACC GCAGTGCTGG CAGATCGCTT TAGCATCGAC CGTTCTCGAC TCACTGCCAT CGGCTATGGC TCTAGCCGCC CATTGGTACT CGAACATACG CCTGATGCTG AAACCCGTAA CCGCCGCGTA GTTGCGGAAG TGACCGGTGA TGATACGACG ACAGATATGA AATGGACGAT TTACTCTGTT GATGAACCCA CTAAATAA
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Protein sequence | MRDTVNIEEM TTTQAYDLSD KDGDGVIEAR ERCNDTAKGA GTDNYGCGKI KAINERKEIN VLFPNDSAYI APEYYPQIEE IAMFLRQYPT TKVTIEGHTS RTGTDERNAV LSQERADAVT AVLADRFSID RSRLTAIGYG SSRPLVLEHT PDAETRNRRV VAEVTGDDTT TDMKWTIYSV DEPTK
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