Gene Shewmr7_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3646 
Symbol 
ID4256144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4341507 
End bp4342064 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID638124330 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_739683 
Protein GI114049133 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGATA CCGTTAATAT TGAAGAAATG ACTACAACCC AGGCCTATGA TCTGTCCGAT 
AAAGATGGTG ACGGCGTGAT TGAAGCGCGT GAACGTTGTA ACGATACAGC CAAAGGTGCG
GGAACGGATA ATTATGGCTG TGGTAAGATA AAAGCCATCA ATGAGCGCAA GGAAATCAAT
GTATTATTTC CAAACGACTC AGCTTATATT GCACCAGAGT ACTATCCACA GATTGAAGAA
ATCGCGATGT TTTTACGTCA ATATCCCACG ACTAAAGTGA CCATCGAAGG CCACACTAGC
CGCACAGGGA CAGATGAAAG AAACGCCGTA CTTTCTCAAG AACGTGCTGA TGCCGTAACC
GCAGTGCTGG CAGATCGCTT TAGCATCGAC CGTTCTCGAC TCACTGCCAT CGGCTATGGC
TCTAGCCGCC CATTGGTACT CGAACATACG CCTGATGCTG AAACCCGTAA CCGCCGCGTA
GTTGCGGAAG TGACCGGTGA TGATACGACG ACAGATATGA AATGGACGAT TTACTCTGTT
GATGAACCCA CTAAATAA
 
Protein sequence
MRDTVNIEEM TTTQAYDLSD KDGDGVIEAR ERCNDTAKGA GTDNYGCGKI KAINERKEIN 
VLFPNDSAYI APEYYPQIEE IAMFLRQYPT TKVTIEGHTS RTGTDERNAV LSQERADAVT
AVLADRFSID RSRLTAIGYG SSRPLVLEHT PDAETRNRRV VAEVTGDDTT TDMKWTIYSV
DEPTK