| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3645 |
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| Symbol | |
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| ID | 4256143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4340044 |
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| End bp | 4341459 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638124329 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_739682 |
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| Protein GI | 114049132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTT CAGTAAGACA ACAATTTCAA TGTTCAAAAC TAGCGATTGT ATTGTCAGTG
ATCCTGTTAC CACTTTCGGC TCAAAGCCAA ACACTAGAGC AAGCGGTAGC ATACACACTC
GATACAAACC CTGATCTACG CGTTGCCTTT AACCGCTTCA AAGCCAGAGA AGAGCAAGTG
AACCAAGCAA TTGCTGGCTA TATGCCAACT ATTGATGTCA CTGGCGGCTA TGGCTATGAA
CAAACCGACA GCGTATCGAC CCGCCGACGT CCAAATGTGG GTGATGTTGA TAGCGATGGG
GTTGCTGAAC TCAACCGTGG TGAGTTTGGT GTTAGCTTAA AGCAAATGCT ATTTGATGGC
TTTTATACCA GCAGTGAAGT TGATCGTTAT AGCTTTGAAG CCAGTGCAGA CCAATGGGCA
CTTCTTGCCG CAGCAGAAGA CATGGCGCTG GATGTCAGCA AAGTCTATCT AAACTACCTG
CGTACCGATG AAGTACTCAA GCTGGCAGAG AAAAACCTCA ACAGCCACAA AGAGATTTAT
GAGCAAATCA AACAACGTAC CGATTCAGGT TTAGGCTCTA CCGCGGATCT TTCGCAAATT
ACCGGCCGTC TTGCACGTGC CAATGCCAAT GTGATTTCTG CCCGCAATAA TCTACTGGAT
GCCAAAGCAC AATTTATTCG TGTGATCGCG GCCGATCCCG TGGACTTGAT CCAACCAGTA
CCAGATGCAG ATTTATTGCC GAAAGATCTC AATTCAGGTC TTAGCGATGC GCAAGAAAAT
CATCCGATCC TCAAATCGGC TGCCAATGAT ATTCGTGCCG CCGAGAACGA ACGCTCATCG
GTTCAAGCCA GCTACTACCC ACAAGTCTCG TTAGAGCTAA ATGGTAACTG GAATAACGAT
GTCGGCGGCG AAGACGGTGT TAGCGCATTA GCCAGCCAAA ACGTCGGAGG CTATAACAAC
GATCTCGTCG CCATGGTGCG AGTGAGATAC AACCTCTTCG CTGGCGGTAA AGATCTTGCC
CGCGAAAAGG AAACCGCCTA CAAGTTAGGT GAAGCTAAAG AAATCCGCCA ACGCGCACAG
CGCGAGGTGG TTGAGGGCGT GAATTTGGCG TGGAACGCCT ATGAAATGTT GGCCCCACAG
AAGCAATATA TTCGCGACCA TGTTATGGCA GCAAAAGATA CCCAATCTGC CTATGCCCAA
CAGTTTAACT TAGGCCAACG CAGCTTACTC GACTTACTCG ATACCGAAAA CGAGCTGTTT
GAGGCACGTA AAGATTACTT ACAAGCCGAA TACGATGAAA TCATTGCAAA ATATCGCGTA
CTCAACTCTA CTGGACGTTT ACTTGACTCC TTAAAAGTTA CTCGCCCAGA AGCATGGCGT
GGTGAACGCA ACTACGAGGG AGGAGCCAAT CAATGA
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| Protein sequence | MKTSVRQQFQ CSKLAIVLSV ILLPLSAQSQ TLEQAVAYTL DTNPDLRVAF NRFKAREEQV
NQAIAGYMPT IDVTGGYGYE QTDSVSTRRR PNVGDVDSDG VAELNRGEFG VSLKQMLFDG
FYTSSEVDRY SFEASADQWA LLAAAEDMAL DVSKVYLNYL RTDEVLKLAE KNLNSHKEIY
EQIKQRTDSG LGSTADLSQI TGRLARANAN VISARNNLLD AKAQFIRVIA ADPVDLIQPV
PDADLLPKDL NSGLSDAQEN HPILKSAAND IRAAENERSS VQASYYPQVS LELNGNWNND
VGGEDGVSAL ASQNVGGYNN DLVAMVRVRY NLFAGGKDLA REKETAYKLG EAKEIRQRAQ
REVVEGVNLA WNAYEMLAPQ KQYIRDHVMA AKDTQSAYAQ QFNLGQRSLL DLLDTENELF
EARKDYLQAE YDEIIAKYRV LNSTGRLLDS LKVTRPEAWR GERNYEGGAN Q
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