Gene Shewmr7_3615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3615 
Symbol 
ID4255034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4295850 
End bp4296176 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content44% 
IMG OID638124299 
Productthioredoxin 
Protein accessionYP_739652 
Protein GI114049102 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AAATTATATA CCTGAGCGAC GACAGCTTCG AAAACGACGT ATTAAAGGCC 
GATTTACCAG TATTGGTAGA CTTCTGGGCT GAATGGTGTG GTCCATGCAA AATGATCGCG
CCAATCCTTG ACGACGTTGC CGAAGAGTAC GCAGGTCGTG TAACTATCGC TAAACTAAAC
GTTGACCAAA ACAACGTTTC TCCAGCGAAA TATGGCGTTC GTGGTATCCC AACTTTACTG
TTGTTCAAGA ACGGTGAATT AGCTGCGACC AAAGTTGGCG CACTGTCTAA AACTCAATTA
AAAGAGTTTA TCGACGCACA AATCTAA
 
Protein sequence
MSDKIIYLSD DSFENDVLKA DLPVLVDFWA EWCGPCKMIA PILDDVAEEY AGRVTIAKLN 
VDQNNVSPAK YGVRGIPTLL LFKNGELAAT KVGALSKTQL KEFIDAQI