| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3508 |
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| Symbol | |
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| ID | 4256254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4155028 |
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| End bp | 4156635 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124192 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_739545 |
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| Protein GI | 114048995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.87525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA TTGCTGCGGC ACCTGAGGCT ATCGCCGCGG GGGCTACACC GAGCGAATAT
GAGCGTGGTA GTCGCCGTTC GTGGATTGCT GTTTTTGGTG GTTTGATTGG CGCCTTTATG
GCGATCCTCG ATATTCAAAT CACCAATGCC TCGATGAAGG AAATCCAAGG TAGTCTCGGC
GCGACGCTGG AGGAGGGCAG TTGGATTTCA ACGGCTTATC TGGTTGCCGA GATGATTGCG
ATCCCGCTCT CGGGTTGGTT AAGCACAGGG CTTTCGGTCA GGCGTTATCT GCTGTGGACT
ACAGCTGCCT TTATCTTTGC TTCTATCCTG TGTTCGATTT CGTGGAACCT CGAGGCCATG
ATCGCCTTTC GGGCGTTGCA GGGTTTCTTT GGTGGCGCGT TGATCCCGCT AGCCTTTCGG
CTGATCTTAG AATTTTTACC CGAGAATAAA CGTGCCGTGG GGATGGCGTT ATTCGGGGTG
ACTGCGACGT TTGCACCCTC GATTGGCCCA ACCTTAGGTG GTTGGTTAAC TGAGCATTTT
AGTTGGCATT ACCTGTTTTA TATCAACGTG CAGCCCGGAT TGCTGGTGAT GGCGATGTTG
GCCTATGGTC TCGAAAAGCG CCCTGTGGTG TGGGATAAAC TGAAGAATGC CGACTTAGCG
GGCATTGTCA CTATGGCGCT AGGCATGGGC TGCCTCGAGG TCGTGCTTGA GGAAGGTAAC
CGCAAGGATT GGTTTGGCTC GGATTTGATC CGCAATCTCG CCATCATTGC CGCCGTGAAT
TTAGTGCTGT TTGTGTGGAT CCAGCTTAAA CGTAAAGATC CTTTAGTGAA TTTACGCCTG
CTCGGTAAAC GCGATTTTGT GCTTTCAACC ATAGCTTACT TTTTGCTGGG GATGGCACTC
TTTGGCGCTA TCTATTTGAT CCCACTTTAT TTGTCTCAAG TGCATGATTA TACGCCGCTG
GAAATCGGCG AAGTCATTAT GTGGATGGGC TTCCCGCAGT TGTTGGTATT GCCATTAGTG
CCGCGTTTAA TGCAACGTTT CGACGGGCGT TATTTAGCCG CCTTCGGCTT TTTTATGTTT
GCCCTCAGTT ATTACATGAA TAGCCAAATG ACCGCCGATT ACGCTGGGCC GCAGATGATC
GCCTCCCAAG TGGTGCGCGC CTTAGGCCAG CCCTTTATCT TGGTGCCCAT TGGTATGCTG
GCGACGGCCC ATTTAAAGCC CCATGAGAAT CCTTCGGCTT CGACCGTATT GAACGTGATG
CGTAACTTAG GCGGTGCCTT TGGTATTGCG CTGGTGGCGA CCTTAAGCGA TAACCTTGCC
CGCGGTCATT TGGCCCATGT GAAGGAGTCT TTACCAGCGG TCAGCACACA GGCGCAGGAT
TATTTGAATC AGAGTGCCAG TATGTTGCAA CAGGGGGGCT CGGATCCCTA TACCGCCTCG
ATGCAGGCCA AGGCTCTGTT AGGGCAAACC ATGAGCCAGC AGGCGTATAT TCAAGCCTAT
AACGATGTGT TTTTGATTAT GGGGGCCCTG TTGTTAATTG CCGTGGTGGC TGTGCTGCTT
ATCCGTAAAC CTCAAGGGCC AGTCGCCCAC GATGCGGTAA TTGAATAA
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| Protein sequence | MSTIAAAPEA IAAGATPSEY ERGSRRSWIA VFGGLIGAFM AILDIQITNA SMKEIQGSLG
ATLEEGSWIS TAYLVAEMIA IPLSGWLSTG LSVRRYLLWT TAAFIFASIL CSISWNLEAM
IAFRALQGFF GGALIPLAFR LILEFLPENK RAVGMALFGV TATFAPSIGP TLGGWLTEHF
SWHYLFYINV QPGLLVMAML AYGLEKRPVV WDKLKNADLA GIVTMALGMG CLEVVLEEGN
RKDWFGSDLI RNLAIIAAVN LVLFVWIQLK RKDPLVNLRL LGKRDFVLST IAYFLLGMAL
FGAIYLIPLY LSQVHDYTPL EIGEVIMWMG FPQLLVLPLV PRLMQRFDGR YLAAFGFFMF
ALSYYMNSQM TADYAGPQMI ASQVVRALGQ PFILVPIGML ATAHLKPHEN PSASTVLNVM
RNLGGAFGIA LVATLSDNLA RGHLAHVKES LPAVSTQAQD YLNQSASMLQ QGGSDPYTAS
MQAKALLGQT MSQQAYIQAY NDVFLIMGAL LLIAVVAVLL IRKPQGPVAH DAVIE
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