| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3487 |
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| Symbol | |
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| ID | 4255441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4130247 |
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| End bp | 4132400 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638124172 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_739525 |
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| Protein GI | 114048975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGG ATAGTTTCCC CGATTCTTTC AGCCCCTCAA AAAATGTTTA TGCCAGCGTA
ATCAGTTCCA GTTGGTTGAT GTTACTCGCC GCCGTTTTTT TTATGGGGAT ATCCTGGTAT
GTCCTCGAAG AATATTTACG AGACCGGGGT GAAGAGCGTT TTAACAATAA TGTTCAAGAT
CTTATTGCTG CCGTCAGCAG TCGCATGACC GCCTATGAGC AAGTATTACG CGGTGGAGTT
GGATTATTTC TGGCCTCTGA TGGGGTGACG CGCCATGAAT GGCAACTCTA TGTTTCTAAT
GCCCGCTTAA CCGAGTATTA CCCAGGAGTT CAAGGTCTAG GCTTCGCGCA GCTCTTAACT
ACAGCCAACT TAGATTCCTT TACGCAAGAG GTGCAACAGG AAGGTTTTAG CGATTATCGA
GTCACTCCCA CAGGTGAGCG GGAGTTCTAC TGCGCCATCA AATATCTAGA GCCATTTGAC
TGGCGCAATC AAAGGGCATT TGGTTTTGAC ATGTGCTCAG AGCCTACCCG CAGAACGGCC
ATCTTACATG CCATTGCCAC AGGGCTTCCT ACCGCATCGG GTAAGGTCAC CTTAGTGCAA
GAAACCCCGG ATGATGCTCA GGCCGGCATT TTAATGTATG TCCCTTTATA CCATGGTCAG
CCGATAACGG AGGAAGAACG TAAACAACAG GCCATAGGCG TTGTTTACGC CCCATTTCGT
ATGAACGACC TGATGCAAGG CATTATGGGA AAACGCTTTT CGGGCTTAAA ATTGGCGATT
TACGATGGGA TTGAGGCTAA CAAGGATACT CTGATGTTTA CTAGCCACAC CGCACTCCCT
TCCGCAGATG ATGTTTTTTA TCAATCCCAG TTAGAGACAA TGGAAGGTCA AGTATGGCGT
TTGGAAGTGT CCTCTGAATC ACGATTTATC TCGAGCTCTG AACAAACGCA AAGCATATGG
TTACAGATAA TTGGAAGTGC GTTTATTTTA GTCCTGTTCT ACTCAGTGCT AACTATGGCG
CGAAATCGCT ATCAAGAATC TCGATTAACG GCAGAGTTAA TCGCTAACGA AAAACGCTTT
CGCCTCGTCA TTGAAGCTTC GCCGAGTGCG CTTTTTATGG TGGATAGGAC GGGCATTATT
ACCTTAGTTA ATACCCATGC TGAACGCTTA TTTGGTTATG CAAGAGATGA GCTGCTCGGC
CGTTCGATCA ATATGTTACT TCCCGAAGCG CTGAGAGATG TGCATCAACA GCATATGGGG
AATTACCTGG TTCAGCCGAT TGCGAAAAAT ATGTCACTAC GGGATGACTT GTTTGGCTGT
TGTAAAGATG GGACGCGCCT AGCGATTGAA GTTGGGTTGA CACCTATCCA CTTCAGCAAT
GGGGTGTCGA TTCTGGCGAC CATTAACAAT GTGTCGGAGC GTAAGCGGAT TGAAGCGCAG
CGCATTGAAC ATACCGCTGA ACTTGAGCGC ATCAACAAGG AACTTGACCA GTTTGCCTAT
ATTGCCTCTC ACGATCTGAA ATCACCTCTG CGTGGCATAG AGCAATTAAC TAACTGGTTA
AGTGAAGAGC TAGCCGAAAA CACCGATGAA AATATCCAAA AATATCTAGG GTTAATCCAA
AGCCGTATTC AACGTATGGT TCTACTACTC GACGGGTTAT TGATGTTTTC GCGTATTGGG
CGGGTTGATG CAGAGCGAGT TGAAGTCGAT TCGCGGCAAC TGATCGAAGA CATGTTTGCC
TTAGTTGCCC CGCCGCAGGG GTTCAGCTTA GCTCTTGAAG GGAATTTCCC AAGGTTTAAG
ACAGTGAAAA CCTTGTTAGA ACTGGTGATT AGAAACTTAA TCAGCAATGC GATTAAACAC
CACGATAAGG GCGAAGGCGT CATCAAAGTG ATATGTGAAA CCTCGAATCA TCATTATTTG
TTTAGCGTGA TTGATGATGG GCCAGGGATT TCTAGCCGTT TTCATGGGAA GGTATTCCAA
ATGTTCCAGA CCCTTAGACC AAGAGATGAA GTCGAAGGCA GTGGTTTGGG ACTCTCTTTA
GTTAAAAAGA CAGTAGAAAG TCTCGGCGGA AAAATTCAAC TAGAATCAGA GGGGCGAGGT
TGCTGTTTCA GATTTAGCTG GCCAATGCAC ATAGTCAACA AGGAGGGGAT ATGA
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| Protein sequence | MDMDSFPDSF SPSKNVYASV ISSSWLMLLA AVFFMGISWY VLEEYLRDRG EERFNNNVQD
LIAAVSSRMT AYEQVLRGGV GLFLASDGVT RHEWQLYVSN ARLTEYYPGV QGLGFAQLLT
TANLDSFTQE VQQEGFSDYR VTPTGEREFY CAIKYLEPFD WRNQRAFGFD MCSEPTRRTA
ILHAIATGLP TASGKVTLVQ ETPDDAQAGI LMYVPLYHGQ PITEEERKQQ AIGVVYAPFR
MNDLMQGIMG KRFSGLKLAI YDGIEANKDT LMFTSHTALP SADDVFYQSQ LETMEGQVWR
LEVSSESRFI SSSEQTQSIW LQIIGSAFIL VLFYSVLTMA RNRYQESRLT AELIANEKRF
RLVIEASPSA LFMVDRTGII TLVNTHAERL FGYARDELLG RSINMLLPEA LRDVHQQHMG
NYLVQPIAKN MSLRDDLFGC CKDGTRLAIE VGLTPIHFSN GVSILATINN VSERKRIEAQ
RIEHTAELER INKELDQFAY IASHDLKSPL RGIEQLTNWL SEELAENTDE NIQKYLGLIQ
SRIQRMVLLL DGLLMFSRIG RVDAERVEVD SRQLIEDMFA LVAPPQGFSL ALEGNFPRFK
TVKTLLELVI RNLISNAIKH HDKGEGVIKV ICETSNHHYL FSVIDDGPGI SSRFHGKVFQ
MFQTLRPRDE VEGSGLGLSL VKKTVESLGG KIQLESEGRG CCFRFSWPMH IVNKEGI
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