| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3468 |
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| Symbol | |
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| ID | 4257664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4112173 |
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| End bp | 4113825 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638124153 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_739506 |
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| Protein GI | 114048956 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCT CACTAATATT CATACTCGCC CTCAGCTTTC CCTTGCTATT GAGTGCCAAT
GTTTTCGCTG CTGATCCTGA ACCAGTCACA GCCACTCAAA CAGCTTCCAT CCCCAATGAA
GCCCAAGTCG AATTAACCAC CTTGCAAACT GCGATTAAAG AAGACATTGC GCGCCTAGCC
GACTCCCAAG GTGAATTGCG CACCATTGTT GAATATCGCA TTCAAAATAA GACCTTACAG
TTACGCAATA AGATAAAACT GTTGTTAGAA GATGGTGGCT ACGATAAAGC CTTTATGCTC
ACGCTCGTAC AAGAGCAGCT GAAATTTAAT CTGAAAATCA ACGATTACTT CAATGATATT
GTGACCAAGT TGTCCCACAC TCTCGGCACG GCGGATGATG AGTCGACCTT ACTGGAGATC
TCAAAACGTG AGCTAGACAA GGACAACAAC TACAAACAAC GGCTCGAGAC TTTAAACTGG
CTTAGCCAAA TGGGCGAAGA TGTGGCGGCG CAAAAAACCG AGCTAACCCA AATCCTCCTT
AGCCGCGCCG ATAACTTTGA TAGTTTTGTC ACTTTTACCC AGCAACAGTT ACAAAACGCA
GTTAACGCCG CCACCAATGC AGGCAAAGAC GTAACAGCGG CACAAACCAG TCGAGTTGTT
CAGTTAAAGG ATAGATTGGC ATTCAACAGC CAGAGCCTCA GCATTGATAT CGACTTACTC
GATGCACTAG ACCAAAACAC CGCCTCACTG AAAAAGACTC TGTTCAGCGT TTCTGGTGAT
ATCACCCAGG ATGTATTAAG CATCGATGTG GCCTCAAGCT TAGTCGAGCA ATGGCTGCAT
ACGGCCAAAG AACAGTCCAT CAACCATGGC CCCACCTTGG TCTTTAAGTT ATTTATCTTC
TGTATGATCC TGTTTGTAGC AAGTCTTGCG GGCAAACTGG CAAAGAAGAT AGTGAGCAAC
ACCGTTAGTA ACTCTAAGTT AAATTTCAGT AAGTTATTGC AAGACTTCTT TACCTCACTC
TCGGGCAAAG CGGTCTTTAC TATCGGTGTA TTGATTGCCC TCTCCCAGCT CGGCATAGAG
TTAGGCCCGT TATTGGCAGG CTTTGGTATC GCCGGTGTGA TCATAGGTTT CGCTCTGCAA
GATTCACTCT CTAACTTTGC CTCGGGCATG ATGATTTTGA TCTATCGCCC CTACGATGTG
GGCGACTTGA TTAACGCAGC TGGCGTAACT GGTCGTGTCA GCCATATGAG CCTAGTCTCC
ACCACAATTA AAACGCTAGA TAACCAAAGA CTTATCATTC CAAACAACAA GATTTGGGGC
GATACCATTA ATAACATTAC CGCCGAGCAT CAACGCCGTG TCGACATGAC CTTCGGTATT
GGTTATGGCG ACAATATTGA GCACGCCGAA GCTGTGCTTA AGTCGATTGT GGAGTCGCAT
CCTAAGGTGC AAAAAATCCC GGCACCGACC ATTAAACTGC ACGTTTTAGG GGAATCCTCG
GTCGACTTTA TCGTTCGTCC TTGGGCCAAA CCCGAAGATT ATTGGGATGT GTATTGGGAT
ATTACCCGCG AAGTGAAAAT GCGCTTCGAT GCCGAGGGCA TTAGCATTCC TTTCCCGCAG
CGCGATGTGC ATATTTACCA AACCAGTAAA TAA
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| Protein sequence | MRRSLIFILA LSFPLLLSAN VFAADPEPVT ATQTASIPNE AQVELTTLQT AIKEDIARLA
DSQGELRTIV EYRIQNKTLQ LRNKIKLLLE DGGYDKAFML TLVQEQLKFN LKINDYFNDI
VTKLSHTLGT ADDESTLLEI SKRELDKDNN YKQRLETLNW LSQMGEDVAA QKTELTQILL
SRADNFDSFV TFTQQQLQNA VNAATNAGKD VTAAQTSRVV QLKDRLAFNS QSLSIDIDLL
DALDQNTASL KKTLFSVSGD ITQDVLSIDV ASSLVEQWLH TAKEQSINHG PTLVFKLFIF
CMILFVASLA GKLAKKIVSN TVSNSKLNFS KLLQDFFTSL SGKAVFTIGV LIALSQLGIE
LGPLLAGFGI AGVIIGFALQ DSLSNFASGM MILIYRPYDV GDLINAAGVT GRVSHMSLVS
TTIKTLDNQR LIIPNNKIWG DTINNITAEH QRRVDMTFGI GYGDNIEHAE AVLKSIVESH
PKVQKIPAPT IKLHVLGESS VDFIVRPWAK PEDYWDVYWD ITREVKMRFD AEGISIPFPQ
RDVHIYQTSK
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