Gene Shewmr7_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3463 
Symbol 
ID4257659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4108694 
End bp4109602 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content53% 
IMG OID638124148 
Productperiplasmic solute binding protein 
Protein accessionYP_739501 
Protein GI114048951 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCA ATTCTAATTT TGTTAAAGCG GCCGCAGCGG CCCTGTCTTT CGCTTGTTCA 
GGCTTTGCCC ACGCAGAGCT GAATGTGTTT GCCTGTGAAC CCGAATATGC CGCATTGGCA
AAAGAGTTGG CTCCAAACGC CAGCATTTAT TCGGCAACCA CGGCCTTACA GGATCCGCAT
CAAGTGCAGG CGCGTCCGAG TTTGATCGCC AAAATGCGCC AAGCGGATCT GGTGGTCTGT
GCGGGCGCCG ATTTAGAAAT CGGTTGGTTG CCAATGCTGC AAATGAAGTC GGCTAACGCT
AAGGTTCGCT CTACCGATCA GGGGCTGTTT TTCGCCGCCG ATCAAATCGA TACCTTAGAT
AAGTTAGCGA GTGTAGATCG CAGCATGGGC GATGTGCATG CCCAGGGAAA TCCGCATATT
CACTTCGATC CGACGCGTTT GCTAAGCGTC GCGAATGCGC TCAGCGCTAA GATGAGCCAA
CTCGACCCGA GTGAGGAGGC GAATTACCAA AAGGCATTAG CGGACTTTAG CACTCGTTGG
CAGGCGGCGA TCCCCCGCTG GGAAGAGCAG GCCAAAGCGC TAAAAGGCAA AAAGGTCATC
GCCTATCACA CTAGTTTTAG ATATCTGTTC AACTGGTTGG GGATTGAACA AGCTGCTGAT
CTTGAGCCTA AACCCGGTCT GGCACCGACT AGCGGCCATT TAGCCAGTTT GCTGAGCCGC
GCCGAGCAGG GCGATATTCT GGCGGTAGTT GTGGCGTCAT ATCAGGATGA GCGTGGTGCT
AAGTGGTTGG GTGAAAAGGC TAATCTACCA GTGCTTATGT TGCCAATGTC GGTAGGTGGC
AACGATGCGA GTCAAGATCT CTTCAGCCTC TACGACAGCG CTATTGCCCT CTTAAACGGG
GTGAAATAG
 
Protein sequence
MRINSNFVKA AAAALSFACS GFAHAELNVF ACEPEYAALA KELAPNASIY SATTALQDPH 
QVQARPSLIA KMRQADLVVC AGADLEIGWL PMLQMKSANA KVRSTDQGLF FAADQIDTLD
KLASVDRSMG DVHAQGNPHI HFDPTRLLSV ANALSAKMSQ LDPSEEANYQ KALADFSTRW
QAAIPRWEEQ AKALKGKKVI AYHTSFRYLF NWLGIEQAAD LEPKPGLAPT SGHLASLLSR
AEQGDILAVV VASYQDERGA KWLGEKANLP VLMLPMSVGG NDASQDLFSL YDSAIALLNG
VK