Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3462 |
Symbol | |
ID | 4257658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4107910 |
End bp | 4108689 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638124147 |
Product | ABC-3 protein |
Protein accession | YP_739500 |
Protein GI | 114048950 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGATC TGGAACTGAT GTCGATCCTG CTGCCAGCAT TGGCGGCGGG GATCTTAGTG CTCTCAACGC ATATTGTACT TGGCAAACAA GTGCTTAAAC GTGGGATCAT CTTTATCGAT TTAGCCATTG CTCAAGTCGC CGCGTTGGGG GCGATTGTGG CGCACATGGA CCACAGGTTA GAAGAGATGC CATTTTCTAA TGTGTGGATG CCGGCCTTAT TCGCCCTTGC GGGGGCGGGT TTTATCGCTT GGTTATCTAA GCGGATGGCG GGTGAGCTAG AGGCGATGAT AGGGTGCTTT TACGTGTTGT CGGCGGTGGC GGCCATGCTA TTGTTGGCGA ACGATCCCCA CGGGGCTGAA CTGTTAAAGC AATTGATGTC GGGCCAGATC CTTTGGGTGA GTTGGTCGCA ATTAGTGTTG CCGACCGTGG TTTATGCGGC TGTGTTAGCG GTGATTTTTC TGCGGCCACA GATCTTAAAC GGTGCGGGAT TCTATCTGCT ATTTGCGCTG GTGATCACTT TGTCGGTAGA GCTGGTTGGG GTCTATTTAG TGTTTAGCAC GCTTATTTTG CCTGCACTTG CGCTCAATAA GTACCAAGGT AAGAACGGCC TATTTTACGC TTATCTGGTC GGCCTTATGG GTTACTTGCT GGGGCTGGTG CTCTCGGCAA CGTTGGACTT ACCGAGCGGC GCGGCAATTG TCGCGACTTT GGCCCTTAGT GCCTTGGTCT TCCGTTTAGG CTTAAGTAAA ACCGCGGCGG TGCGCCAGGT CGCAAACTAG
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Protein sequence | MLDLELMSIL LPALAAGILV LSTHIVLGKQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL EEMPFSNVWM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE LLKQLMSGQI LWVSWSQLVL PTVVYAAVLA VIFLRPQILN GAGFYLLFAL VITLSVELVG VYLVFSTLIL PALALNKYQG KNGLFYAYLV GLMGYLLGLV LSATLDLPSG AAIVATLALS ALVFRLGLSK TAAVRQVAN
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