Gene Shewmr7_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3462 
Symbol 
ID4257658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4107910 
End bp4108689 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content53% 
IMG OID638124147 
ProductABC-3 protein 
Protein accessionYP_739500 
Protein GI114048950 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATC TGGAACTGAT GTCGATCCTG CTGCCAGCAT TGGCGGCGGG GATCTTAGTG 
CTCTCAACGC ATATTGTACT TGGCAAACAA GTGCTTAAAC GTGGGATCAT CTTTATCGAT
TTAGCCATTG CTCAAGTCGC CGCGTTGGGG GCGATTGTGG CGCACATGGA CCACAGGTTA
GAAGAGATGC CATTTTCTAA TGTGTGGATG CCGGCCTTAT TCGCCCTTGC GGGGGCGGGT
TTTATCGCTT GGTTATCTAA GCGGATGGCG GGTGAGCTAG AGGCGATGAT AGGGTGCTTT
TACGTGTTGT CGGCGGTGGC GGCCATGCTA TTGTTGGCGA ACGATCCCCA CGGGGCTGAA
CTGTTAAAGC AATTGATGTC GGGCCAGATC CTTTGGGTGA GTTGGTCGCA ATTAGTGTTG
CCGACCGTGG TTTATGCGGC TGTGTTAGCG GTGATTTTTC TGCGGCCACA GATCTTAAAC
GGTGCGGGAT TCTATCTGCT ATTTGCGCTG GTGATCACTT TGTCGGTAGA GCTGGTTGGG
GTCTATTTAG TGTTTAGCAC GCTTATTTTG CCTGCACTTG CGCTCAATAA GTACCAAGGT
AAGAACGGCC TATTTTACGC TTATCTGGTC GGCCTTATGG GTTACTTGCT GGGGCTGGTG
CTCTCGGCAA CGTTGGACTT ACCGAGCGGC GCGGCAATTG TCGCGACTTT GGCCCTTAGT
GCCTTGGTCT TCCGTTTAGG CTTAAGTAAA ACCGCGGCGG TGCGCCAGGT CGCAAACTAG
 
Protein sequence
MLDLELMSIL LPALAAGILV LSTHIVLGKQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL 
EEMPFSNVWM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE
LLKQLMSGQI LWVSWSQLVL PTVVYAAVLA VIFLRPQILN GAGFYLLFAL VITLSVELVG
VYLVFSTLIL PALALNKYQG KNGLFYAYLV GLMGYLLGLV LSATLDLPSG AAIVATLALS
ALVFRLGLSK TAAVRQVAN