| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3434 |
|---|
| Symbol | mutL |
|---|
| ID | 4256706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4068935 |
|---|
| End bp | 4070869 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124115 |
|---|
| Product | DNA mismatch repair protein |
|---|
| Protein accession | YP_739472 |
|---|
| Protein GI | 114048922 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
|---|
| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0482547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.130022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATCC AGATCCTTCC GCCGCAACTA GCCAACCAAA TCGCCGCCGG AGAGGTGGTC
GAACGGCCGG CTTCTGTGGT GAAGGAACTT GTCGAGAACA GCCTAGATGC TGGGGCGACG
CGTATCGATA TCGAAATCGA TAAGGGCGGC AGCAAGCTGA TTAAGATCCG CGACAATGGT
TCGGGGATCC CAAAGGATGA GCTGGCTTTG GCCTTGTCGC GCCATGCCAC CTCGAAACTG
CACTCCCTTG ACGACCTTGA AGCCATCCTC AGCTTTGGTT TTCGCGGCGA GGCATTGGCG
AGTATCAGCT CTGTGTCCCG CTTAACCTTG ACCTCGCGTA CGGCCGAGCA AACGGAAGCC
TGGCAGGCTT ATGCCGAAGG CGTCGACATG GCGGTTAAGG TGATGCCGGC CGCACATCCT
GTTGGTTCAA CTATCGAAGT TGTCGACCTG TTCTTTAATA CGCCCGCCCG TAGACGTTTT
CTTAAAAGCG ATAAAACCGA ATTTACCCAT ATCGATGAAT GGTTAAAACG CATTGCGTTA
GTGCGTGGGG ATATCCACTT TACCTTGACC CACAATGGCA AAACCGTACG TAACTATCGT
CCGGCGATGA ATGAGCCGCA GTATTTGCAG CGATTGACTC AGGTTGCTGG ACGCCAATTT
GCCGATGAGG CGTTGCGGGT CGAATGCCAA CACGACGACC TGCGTTTAAG TGGTTATTTA
CAGTCGCCTT GGTCAACGGT GTTAACCGAC ACCCATTACT TTTATGTGAA TGGCCGCTTA
GTGCGTGACC GTTTAGTCAA TCATGCGGTG CGCCAAGCAT TTGCCCAAAA AGCCGAGGTT
GAACAGCCGG GTTATGTGTT GATGCTGGAT ATCGATCCCC ATCAGGTGGA TGTGAACGTG
CATCCGGCGA AACACGAAGT GCGCTTTCAT CAGAGCCGTT ATGTGCATGA TTATATTCTT
CAGGCACTGC AATCGGCGCT CGAAGAAGCG GGCGAGCTGG GTTTTGAGCG TCCTTTCGAG
CCTAGTTCGC CACAGGTTAG GGATGAGGTC TCTCTCTCTG AATCTGGGGC GCAGACACAA
ACAGAGCATC ATGCCTTCGA GCTGCAATCT CCTGAATCTA AAACTCATTC AACTTGGGAT
GAAGCTTCAC GTGTTGATAC TTCTCGTGCC GAGATATCAC GGGATTCGTC GCTAGGTGAG
CGTACTCGGG ATATTGCTAG CACGCGTCCG TACGCTGGCG TGCAGAGCAA TGCCTACGGT
AGTATGGCCG TTCCGCGGGA ATCACGCAGT GGTTCGACAG GGGAAAGTCG TGCCCGAGCC
GAGCTTCCTT CTAAGGTGGC TATCGCCAGT TACGGCGAAT TATTGCAAAC GCCATCCTAT
AACGTGCAGG ACAAGCCGTA TCAACCCGTG CTTGCAATGC CCGCCATACT CAATGGTCAA
TATTGGGTAT TAGCGCAAGA GCAAAACCTG AGTCTGTTGC CGATTCAATC TGTGGCGTTA
GCGACACGTA GCCATGAGAT AGAAACAAAG CTGGCAACCG GCTTGATAGG TCAGCCCTTA
TTGATGCCAG TATCGATTGC CGCCGATACG GATTGGCCAG CATTACTCGA AGAACATGAA
ACACTTATCC GGCAATTAGG ATTAGAACTA ACAATTCGCT ATCAGCAGTT GATAATCAAA
AAAGTGCCCC CATATCTCAG GGATAGTCAG TTAGCGAAGG TGATCCCCGA GTGGTTGCAA
TCGCTACGTT TTGAAGCGCC AGCACCTAAT GCATTGGCTG TGTGGCTGGC AGAACAGAGT
TTAACTGGAT TTACCTCGGC TGCGGATATT TGGGCGGCCT ATTGCCAGTT AACTGAAGAG
AAAAGACAGC AAATTGCCGA TAAAGCAGTA TCCTTACCTT GGCAATCGTG GCTAGAAGAG
CAAGCAATTG AATAA
|
|---|
| Protein sequence | MGIQILPPQL ANQIAAGEVV ERPASVVKEL VENSLDAGAT RIDIEIDKGG SKLIKIRDNG
SGIPKDELAL ALSRHATSKL HSLDDLEAIL SFGFRGEALA SISSVSRLTL TSRTAEQTEA
WQAYAEGVDM AVKVMPAAHP VGSTIEVVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL
VRGDIHFTLT HNGKTVRNYR PAMNEPQYLQ RLTQVAGRQF ADEALRVECQ HDDLRLSGYL
QSPWSTVLTD THYFYVNGRL VRDRLVNHAV RQAFAQKAEV EQPGYVLMLD IDPHQVDVNV
HPAKHEVRFH QSRYVHDYIL QALQSALEEA GELGFERPFE PSSPQVRDEV SLSESGAQTQ
TEHHAFELQS PESKTHSTWD EASRVDTSRA EISRDSSLGE RTRDIASTRP YAGVQSNAYG
SMAVPRESRS GSTGESRARA ELPSKVAIAS YGELLQTPSY NVQDKPYQPV LAMPAILNGQ
YWVLAQEQNL SLLPIQSVAL ATRSHEIETK LATGLIGQPL LMPVSIAADT DWPALLEEHE
TLIRQLGLEL TIRYQQLIIK KVPPYLRDSQ LAKVIPEWLQ SLRFEAPAPN ALAVWLAEQS
LTGFTSAADI WAAYCQLTEE KRQQIADKAV SLPWQSWLEE QAIE
|
|---|
| |