Gene Shewmr7_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3422 
Symbol 
ID4256694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4056726 
End bp4059206 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content49% 
IMG OID638124103 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_739460 
Protein GI114048910 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.286167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG TAATGCGAAA TTTGGGTTTA AGTGCGTTAG CCGTTGCGGT ATTGACGAGT 
TGCGCCGCCA CCTCAACCGA AACGGCGACT CCCGCGACCA CACCACAGGC TTATCAAGTC
CCTTTAGCTC AGCCTCCCCA AGTTTCACAA CCCCTTACGT TGAATCAAAT TATGGCGAAC
CCCGATTGGA TGGGGATTTT CGCTAAGGAA GCTTACTGGA GCGATGACAG CCAGAGCGTT
TTCTTTGCCC GTCAACCTAG CGCGTCGCCG CTACGGAATT ATTATCAGCA GGGCATTAAT
GACAGCCGCG CCGTTGAACT GGCCATAGAT AAGTTATACG CGGCGGATCA ACAATTTGGC
GTATTCGATA GCACCAAGGC CAACAAGGCT TATCTCTATC AAGGCAATAT TTTTGTTAAG
CATTTAAGTT CTGGCAAAAT CACCCAGCTT ACCCGTCAGC GCACTGCCAT CAGTGGCCTG
CGTTACCTTA ACAATGGCGA TATCGCTTAT TGGCAAGGGG ATAATGTTTT CCAAATCCAT
CAAGACAGTG GATTAGTGGA ACAGCTGGCT GAAATAAAAA TGGCGAAAGC GCCCGAGGGT
GTGAAAGAGC CAAGCAGCTA CTTAGCCAAG CAGCAGCACA GACTCATTCA ATATGTGGCG
TTGCAGCAAG AAAATGCCAA AGCCAAAGAA CAGTTTAAGA ACGATCTGCA AAAGAGCGAT
CCGACCCTCG CCGCTAACAC TTGGTATCTA GGGGATGCCG AGGTGGTGTC TGAGCTAAGT
CTGTCGCCAG ACGGTCGCTA TCTGTTTGTG GCCCTAACCG ATAAAAATTA CACCGGCAGC
AGTGAACACG ACATCATGCC AAACTACCTC GGTAGTGAAG GCTATATCGA TCCTGTGCCA
GTCCGCGCCC GTGTTGCAGA AGATACGCCG CCTGGCCAAC GCTTTGTGGT GCTCGATCTC
AATGAGCATA AACAGATTGA TGTGACTATC GAAGGTTTAA CCGGCTTCGA TGAGGACGTT
TTAGCTAAGG TTAAGAGTGA AAATGCTAAG GCAAAAGGTG AGTCGTATCA AAGTACTAAG
GCTCCCCGTA AAATCCAGCT GATGCAGGAT TGGGGCTGGA CTCAAAGCGC GATTCAATGG
CATGAGTCTG AGGATAAGCT GGCGGTGATG GTCGAAGCGA CCGATAACAA AGACCGCTGG
ATTGCCAGTG TCGATCTGTC AAAGGGTAAG TTTATCACCG AGCATCGCCT GCATGATGAT
GCTTGGGTGA ACTACGACTA TAACCAATTT GGCTGGTTAC CAGGTACGGA CACTCTGTAC
TATCTCTCTG AAGAAACAGG TTATTCCCAG CTTTATATCA AAGCCCGCAG CGAAAAGCCC
CGCGCTTTGA CTCAAGGTAA GTTTGTGGTG AGCGATATTA CTCTCTCGCC CGATGCAAAC
TATATCTACT ACAAGGCTAA CCAAAGTCAC CCAGGTATTT ACAACGTTCA CCGTGTGAAT
ATCGCCTCGG GCAAAAATGA GCAATTAACC CAGTGGGACG GTAACTTAGA TTACAGCTTA
AGCCCCGATG GCACTAAGTT GCTGCTGAAT GCGTCTCGCC GTACAGCGCC GAATGAGCTG
TATATTCAAC CGATTGGCGG TGAGTTAAAA CAACTCACGT CATACACCAG CGATGCCTTT
AAGCAATATC CATGGCAAGC GCCAGAAGTA GTAGCAGTAC CTTCTAACCA TGGCGCTGGC
CAAGTGTATG CGCGGGTTTA TTTGCCGCAG GGTTACGACA AATCCCGCGC CGAGAAATAC
CCCGCCGTTA TCTTCAACCA TGGTGCGGGC TACTTACAGA ATGCCGATTA TGGTTTCAGT
GGTTACTTCC GTGAGTTTAT GTTCCACAAC CTACTGACTC AACAAGGTTA TGTGGTGATG
GACATGGATT ACCGTGGTTC TAAAGGTTAT GGCCGCGACT GGCGCACGGC GATTTATCGC
AACATGGGTC ACCCTGAGGT CGAAGACTTA AAAGACGGCG TGACTTGGAT GGGCCAAAAT
GCCAATGTGG ATATTAAGCG CGTTGGTACT TATGGCGGTT CTTACGGTGG CTTCTTAACC
TTTATGTCCT TGTTTACTGA GCCGGAATTA TTCCAAGCAG GCGCTGCACT GCGCCCTGTG
GCGGATTGGG CACATTACAA CGCGCCATAC ACCTCCAACA TTTTAAACAC ACCGGATGTT
GACCCTATCG CGTACGAGCG TAGCTCGCCT ATCGAGCATG CCCAAGGTCT GACTAAGCCG
CTACTGATCA TGAGTGGCGT GATGGATGAC AACGTGTTCT TCCAAGATAG CGTGCGCATG
GTGCAGCACC TTATCGAGCT GGAAAAACCT ATGTTCGAAA CGGCTATTTA TCCGGTTGAG
CCCCATGGTT TCCGTCAGCC ATCGAGCTGG TTGGACGAAT ATCGCCGTAT TTATAAGCTG
TTTGAACAAG AGCTTAAGTA A
 
Protein sequence
MNSVMRNLGL SALAVAVLTS CAATSTETAT PATTPQAYQV PLAQPPQVSQ PLTLNQIMAN 
PDWMGIFAKE AYWSDDSQSV FFARQPSASP LRNYYQQGIN DSRAVELAID KLYAADQQFG
VFDSTKANKA YLYQGNIFVK HLSSGKITQL TRQRTAISGL RYLNNGDIAY WQGDNVFQIH
QDSGLVEQLA EIKMAKAPEG VKEPSSYLAK QQHRLIQYVA LQQENAKAKE QFKNDLQKSD
PTLAANTWYL GDAEVVSELS LSPDGRYLFV ALTDKNYTGS SEHDIMPNYL GSEGYIDPVP
VRARVAEDTP PGQRFVVLDL NEHKQIDVTI EGLTGFDEDV LAKVKSENAK AKGESYQSTK
APRKIQLMQD WGWTQSAIQW HESEDKLAVM VEATDNKDRW IASVDLSKGK FITEHRLHDD
AWVNYDYNQF GWLPGTDTLY YLSEETGYSQ LYIKARSEKP RALTQGKFVV SDITLSPDAN
YIYYKANQSH PGIYNVHRVN IASGKNEQLT QWDGNLDYSL SPDGTKLLLN ASRRTAPNEL
YIQPIGGELK QLTSYTSDAF KQYPWQAPEV VAVPSNHGAG QVYARVYLPQ GYDKSRAEKY
PAVIFNHGAG YLQNADYGFS GYFREFMFHN LLTQQGYVVM DMDYRGSKGY GRDWRTAIYR
NMGHPEVEDL KDGVTWMGQN ANVDIKRVGT YGGSYGGFLT FMSLFTEPEL FQAGAALRPV
ADWAHYNAPY TSNILNTPDV DPIAYERSSP IEHAQGLTKP LLIMSGVMDD NVFFQDSVRM
VQHLIELEKP MFETAIYPVE PHGFRQPSSW LDEYRRIYKL FEQELK