Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3422 |
Symbol | |
ID | 4256694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4056726 |
End bp | 4059206 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124103 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_739460 |
Protein GI | 114048910 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.286167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG TAATGCGAAA TTTGGGTTTA AGTGCGTTAG CCGTTGCGGT ATTGACGAGT TGCGCCGCCA CCTCAACCGA AACGGCGACT CCCGCGACCA CACCACAGGC TTATCAAGTC CCTTTAGCTC AGCCTCCCCA AGTTTCACAA CCCCTTACGT TGAATCAAAT TATGGCGAAC CCCGATTGGA TGGGGATTTT CGCTAAGGAA GCTTACTGGA GCGATGACAG CCAGAGCGTT TTCTTTGCCC GTCAACCTAG CGCGTCGCCG CTACGGAATT ATTATCAGCA GGGCATTAAT GACAGCCGCG CCGTTGAACT GGCCATAGAT AAGTTATACG CGGCGGATCA ACAATTTGGC GTATTCGATA GCACCAAGGC CAACAAGGCT TATCTCTATC AAGGCAATAT TTTTGTTAAG CATTTAAGTT CTGGCAAAAT CACCCAGCTT ACCCGTCAGC GCACTGCCAT CAGTGGCCTG CGTTACCTTA ACAATGGCGA TATCGCTTAT TGGCAAGGGG ATAATGTTTT CCAAATCCAT CAAGACAGTG GATTAGTGGA ACAGCTGGCT GAAATAAAAA TGGCGAAAGC GCCCGAGGGT GTGAAAGAGC CAAGCAGCTA CTTAGCCAAG CAGCAGCACA GACTCATTCA ATATGTGGCG TTGCAGCAAG AAAATGCCAA AGCCAAAGAA CAGTTTAAGA ACGATCTGCA AAAGAGCGAT CCGACCCTCG CCGCTAACAC TTGGTATCTA GGGGATGCCG AGGTGGTGTC TGAGCTAAGT CTGTCGCCAG ACGGTCGCTA TCTGTTTGTG GCCCTAACCG ATAAAAATTA CACCGGCAGC AGTGAACACG ACATCATGCC AAACTACCTC GGTAGTGAAG GCTATATCGA TCCTGTGCCA GTCCGCGCCC GTGTTGCAGA AGATACGCCG CCTGGCCAAC GCTTTGTGGT GCTCGATCTC AATGAGCATA AACAGATTGA TGTGACTATC GAAGGTTTAA CCGGCTTCGA TGAGGACGTT TTAGCTAAGG TTAAGAGTGA AAATGCTAAG GCAAAAGGTG AGTCGTATCA AAGTACTAAG GCTCCCCGTA AAATCCAGCT GATGCAGGAT TGGGGCTGGA CTCAAAGCGC GATTCAATGG CATGAGTCTG AGGATAAGCT GGCGGTGATG GTCGAAGCGA CCGATAACAA AGACCGCTGG ATTGCCAGTG TCGATCTGTC AAAGGGTAAG TTTATCACCG AGCATCGCCT GCATGATGAT GCTTGGGTGA ACTACGACTA TAACCAATTT GGCTGGTTAC CAGGTACGGA CACTCTGTAC TATCTCTCTG AAGAAACAGG TTATTCCCAG CTTTATATCA AAGCCCGCAG CGAAAAGCCC CGCGCTTTGA CTCAAGGTAA GTTTGTGGTG AGCGATATTA CTCTCTCGCC CGATGCAAAC TATATCTACT ACAAGGCTAA CCAAAGTCAC CCAGGTATTT ACAACGTTCA CCGTGTGAAT ATCGCCTCGG GCAAAAATGA GCAATTAACC CAGTGGGACG GTAACTTAGA TTACAGCTTA AGCCCCGATG GCACTAAGTT GCTGCTGAAT GCGTCTCGCC GTACAGCGCC GAATGAGCTG TATATTCAAC CGATTGGCGG TGAGTTAAAA CAACTCACGT CATACACCAG CGATGCCTTT AAGCAATATC CATGGCAAGC GCCAGAAGTA GTAGCAGTAC CTTCTAACCA TGGCGCTGGC CAAGTGTATG CGCGGGTTTA TTTGCCGCAG GGTTACGACA AATCCCGCGC CGAGAAATAC CCCGCCGTTA TCTTCAACCA TGGTGCGGGC TACTTACAGA ATGCCGATTA TGGTTTCAGT GGTTACTTCC GTGAGTTTAT GTTCCACAAC CTACTGACTC AACAAGGTTA TGTGGTGATG GACATGGATT ACCGTGGTTC TAAAGGTTAT GGCCGCGACT GGCGCACGGC GATTTATCGC AACATGGGTC ACCCTGAGGT CGAAGACTTA AAAGACGGCG TGACTTGGAT GGGCCAAAAT GCCAATGTGG ATATTAAGCG CGTTGGTACT TATGGCGGTT CTTACGGTGG CTTCTTAACC TTTATGTCCT TGTTTACTGA GCCGGAATTA TTCCAAGCAG GCGCTGCACT GCGCCCTGTG GCGGATTGGG CACATTACAA CGCGCCATAC ACCTCCAACA TTTTAAACAC ACCGGATGTT GACCCTATCG CGTACGAGCG TAGCTCGCCT ATCGAGCATG CCCAAGGTCT GACTAAGCCG CTACTGATCA TGAGTGGCGT GATGGATGAC AACGTGTTCT TCCAAGATAG CGTGCGCATG GTGCAGCACC TTATCGAGCT GGAAAAACCT ATGTTCGAAA CGGCTATTTA TCCGGTTGAG CCCCATGGTT TCCGTCAGCC ATCGAGCTGG TTGGACGAAT ATCGCCGTAT TTATAAGCTG TTTGAACAAG AGCTTAAGTA A
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Protein sequence | MNSVMRNLGL SALAVAVLTS CAATSTETAT PATTPQAYQV PLAQPPQVSQ PLTLNQIMAN PDWMGIFAKE AYWSDDSQSV FFARQPSASP LRNYYQQGIN DSRAVELAID KLYAADQQFG VFDSTKANKA YLYQGNIFVK HLSSGKITQL TRQRTAISGL RYLNNGDIAY WQGDNVFQIH QDSGLVEQLA EIKMAKAPEG VKEPSSYLAK QQHRLIQYVA LQQENAKAKE QFKNDLQKSD PTLAANTWYL GDAEVVSELS LSPDGRYLFV ALTDKNYTGS SEHDIMPNYL GSEGYIDPVP VRARVAEDTP PGQRFVVLDL NEHKQIDVTI EGLTGFDEDV LAKVKSENAK AKGESYQSTK APRKIQLMQD WGWTQSAIQW HESEDKLAVM VEATDNKDRW IASVDLSKGK FITEHRLHDD AWVNYDYNQF GWLPGTDTLY YLSEETGYSQ LYIKARSEKP RALTQGKFVV SDITLSPDAN YIYYKANQSH PGIYNVHRVN IASGKNEQLT QWDGNLDYSL SPDGTKLLLN ASRRTAPNEL YIQPIGGELK QLTSYTSDAF KQYPWQAPEV VAVPSNHGAG QVYARVYLPQ GYDKSRAEKY PAVIFNHGAG YLQNADYGFS GYFREFMFHN LLTQQGYVVM DMDYRGSKGY GRDWRTAIYR NMGHPEVEDL KDGVTWMGQN ANVDIKRVGT YGGSYGGFLT FMSLFTEPEL FQAGAALRPV ADWAHYNAPY TSNILNTPDV DPIAYERSSP IEHAQGLTKP LLIMSGVMDD NVFFQDSVRM VQHLIELEKP MFETAIYPVE PHGFRQPSSW LDEYRRIYKL FEQELK
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