Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3376 |
Symbol | |
ID | 4257467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3994481 |
End bp | 3994969 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638124058 |
Product | hypothetical protein |
Protein accession | YP_739415 |
Protein GI | 114048865 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.879379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00180507 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAAAA TATTTGAAAG GCTAATGTAC GCATCACGCT GGATTATGGC GCCCATCTAT TTGGGACTGA GTCTAGTGTT GTTGGGTTTA GGCATTAAAT TCTTCCAAGA GATCTTCCAT ATTCTGCCGA TTATTTTTGA GATGACCGAA GTGGATCTGG TGTTGGTCAC CCTGTCCTTA ATTGATATCA CCCTAGTGGG CGGTCTGATT GTGATGGTGA TGTTTTCTGG CTATGAGAAT TTTGTCTCGC AGCTGGATGT CGGCGAAGAC AGTGAGAAGC TCAGCTGGTT GGGTAAATTA GATTCAGGCT CACTCAAAAA CAAAGTGGCT GCTTCGATTG TGGCAATTTC GTCAATTCAC CTGCTGAAAA TCTTTATGGA TGTGAAGAAT ATCGATAACG ACAAAATCAT GTGGTACCTA CTTATCCATA TCACCTTTGT GGTATCGGCC TTTGCCATGG GTTACTTGGA TAAGATGACT CGTAAATAA
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Protein sequence | MEKIFERLMY ASRWIMAPIY LGLSLVLLGL GIKFFQEIFH ILPIIFEMTE VDLVLVTLSL IDITLVGGLI VMVMFSGYEN FVSQLDVGED SEKLSWLGKL DSGSLKNKVA ASIVAISSIH LLKIFMDVKN IDNDKIMWYL LIHITFVVSA FAMGYLDKMT RK
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