Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3344 |
Symbol | |
ID | 4255757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3959672 |
End bp | 3960649 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124026 |
Product | KpsF/GutQ family protein |
Protein accession | YP_739383 |
Protein GI | 114048833 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.275941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGACC AATCACAATT GCGCCAGTGG GGCTGTAAAG TCATCGATAT TGAAAAATCG GCCCTCGACA ATCTTTATCA ATATGTCGAT TCCGTTGAAT TCGCCCAAGC CTGCGAACTT ATTCTCAACT GTACCGGCAA AGTGATAGTG ATGGGGATGG GAAAATCAGG CCATATTGGC AATAAAATCT CGGCCACCCT AGCCAGCACA GGTACCCCAG CTTTTTTTGT CCATCCAGGT GAAGCCAGCC ATGGTGACCT AGGCGTGCTC TCGGACAATG ATGTGATTCT TGCGATTTCA AACTCGGGCG AGTCGAGCGA AATCCTCGCG CTGATGCCCG TTATCCAACG TAAAGCCATC CCAGTGATTG CCATGACAGG CAAGCCAGAA TCCACCATGG CGCGTCTATC TAAAATTCAT TTATGTATTG AAGTACCAGA GGAAGCCTGC CCGCTTGGGC TTGCGCCAAC CTCAAGTACC ACAGCAACCT TAGTCATGGG CGATGCCATC GCCATTGCTC TGTTGCAAGC CAAAGGTTTT ACCCGAGAAG ATTTCGCCAT GTCCCATCCG GGCGGCGCCT TAGGTCGTAA GCTGCTGCTT AAGGTCAGCA ACGTGATGCA CAGCGGTGAT GACTTACCTC TGGTTAAACA CGATATCTGT ATCACCGAAG CCCTATATGA GATCTCCAAG AAAGGCCTTG GCATGACCGC GGTTATCGAT GAGCAAAACA AACTCGTGGG TATCTTTACC GACGGTGACC TGCGCCGCGT TATCGATGCC CAAGTCAACC TACGCACCAC GCCGATTGCC GATGTGATGA CGCGAAACTG TGTCACAATT ACTGAAAACG TTTTAGCGGC ACAGGCGCTG CAGGTGATGG ATTCCAAAAA TATCAACGGC CTGATAGTGA TAGATAAAGA ACATCATCCT GTCGGAGCCC TCAATATGCT CGATATGGTT AAAGCGGGAG TGATTTAA
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Protein sequence | MVDQSQLRQW GCKVIDIEKS ALDNLYQYVD SVEFAQACEL ILNCTGKVIV MGMGKSGHIG NKISATLAST GTPAFFVHPG EASHGDLGVL SDNDVILAIS NSGESSEILA LMPVIQRKAI PVIAMTGKPE STMARLSKIH LCIEVPEEAC PLGLAPTSST TATLVMGDAI AIALLQAKGF TREDFAMSHP GGALGRKLLL KVSNVMHSGD DLPLVKHDIC ITEALYEISK KGLGMTAVID EQNKLVGIFT DGDLRRVIDA QVNLRTTPIA DVMTRNCVTI TENVLAAQAL QVMDSKNING LIVIDKEHHP VGALNMLDMV KAGVI
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