Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3343 |
Symbol | |
ID | 4255756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3958294 |
End bp | 3959112 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638124025 |
Product | ABC transporter related |
Protein accession | YP_739382 |
Protein GI | 114048832 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.279252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAG AACAAACGCC GTTGGTTGAG ATCCGTCATT TGGGCTTCAG CCGTGGCCAG CGTGTCATAT ATGAAGATAT TAGCCTGTCT ATCCCTCGGG GCAAAGTGAC CGCCATTATG GGCCCCAGTG GTATAGGTAA AACCACTTTG CTTAAGCTTA TCGGTGGCCA ATTAACGCCC GATAGCGGCC AAGTGTTGTT CGATGGTCAG GATGTGCACG CCGCGAGTCG TAATGAATTA TTCGAGCTGC GTAAGCGCAT GAGCATGTTG TTTCAAAGTG GCGCCTTATT CACCGATATC AACGTCTTCG ATAACGTCGC CTTTGCGCTG CGTGAGCATT CGGGATTGCC TGAAGAGATT ATCCGCTCAA TCGTATTGAT GAAGCTCGAA GCCGTTGGCC TGCGTGGCGC CGCGCAGATG ATGCCAAGTG AGTTATCCGG TGGGATGCAG CGCCGTGCCG CCCTTGCTCG GGCGATTGCC CTTGAGCCTG AAATGGTGAT GTACGATGAG CCCTTTGCCG GACAAGACCC GATTTCCATG GGCGTGCTGG TGAAGCTTAT CCGCGAACTC TCCGATGCGC TAAATCTGAC CTCGATCGTG GTGTCCCACG ATGTGGATGA AGTGCTCGGA ATTGCAGATT ATGTGTATGT GGTGGCCGAT AAAAGAGTGA TCGCCCATGG CACGCCTGAG GAGCTAAAGC ATGCGGATAA TCCGCAGCTC AAACAGTTTA TTCAAGGCGC GCCCGATGGT CCCGTGCCTT TCCACTATCC AGCAAAGGAT TATCAGCAAG AATTAATGGC TAAAGGAGTT GGCAAGTGA
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Protein sequence | MTQEQTPLVE IRHLGFSRGQ RVIYEDISLS IPRGKVTAIM GPSGIGKTTL LKLIGGQLTP DSGQVLFDGQ DVHAASRNEL FELRKRMSML FQSGALFTDI NVFDNVAFAL REHSGLPEEI IRSIVLMKLE AVGLRGAAQM MPSELSGGMQ RRAALARAIA LEPEMVMYDE PFAGQDPISM GVLVKLIREL SDALNLTSIV VSHDVDEVLG IADYVYVVAD KRVIAHGTPE ELKHADNPQL KQFIQGAPDG PVPFHYPAKD YQQELMAKGV GK
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