Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3309 |
Symbol | |
ID | 4255404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3918694 |
End bp | 3919365 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638123991 |
Product | ABC transporter related |
Protein accession | YP_739348 |
Protein GI | 114048798 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAG TAGCCAAACT TATCCAAGTA AGTAAAAGTT TTCGCGACGG CGAGCAGCGC CATACCGTAC TGCAAGCCGT CGATTTAACC TTGCATCGCG GCGAAACCAT CGCACTCACG GGCCCCAGCG GCAGCGGTAA AAGCACACTG CTAAATTTGA TCGCAGGCTT TGAAACGCCA GACAGCGGCC AGATAGTGTT GAACCATCAA TCCACCCAAG ATTGGCAAGA CAAACACTGG AGCGAGTTCA GGCGCAACCA TTTGGGCGTG GTGTTTCAAC AATTTAATCT GCTGACTCCG CTCAATGTGA GAAACAACAT AGGTTTTTCA CTCAATCTCA ACGGCGCCAG TTGGAATCCT TGGTGCGATT ATCTCGTCGA CAAATTGGGG CTGGCTTCGT TGCTCAATCG GCAGGTCGAA GCGCTTTCAG GCGGGCAACA GCAAAGGGTC GCTATCGCCA GAGCCTTAGC CCACAACCCG AGTTTACTGC TGGCCGACGA ACCCACGGGT AACCTCGATG ATGAATCGGG CAAACAGGTG ATGTCGCTGC TGTGCGAACT GGCCAAAGAA AGCCAAACCA GCATACTCAT GGTCACCCAC AGTGAAGAAT GCGCCGCTTT TATGCACAAA CGCTGGCATC TTTCCCACGC CGCTGTGTCA ATCTCCGGTT AA
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Protein sequence | MSEVAKLIQV SKSFRDGEQR HTVLQAVDLT LHRGETIALT GPSGSGKSTL LNLIAGFETP DSGQIVLNHQ STQDWQDKHW SEFRRNHLGV VFQQFNLLTP LNVRNNIGFS LNLNGASWNP WCDYLVDKLG LASLLNRQVE ALSGGQQQRV AIARALAHNP SLLLADEPTG NLDDESGKQV MSLLCELAKE SQTSILMVTH SEECAAFMHK RWHLSHAAVS ISG
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