Gene Shewmr7_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3309 
Symbol 
ID4255404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3918694 
End bp3919365 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content52% 
IMG OID638123991 
ProductABC transporter related 
Protein accessionYP_739348 
Protein GI114048798 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG TAGCCAAACT TATCCAAGTA AGTAAAAGTT TTCGCGACGG CGAGCAGCGC 
CATACCGTAC TGCAAGCCGT CGATTTAACC TTGCATCGCG GCGAAACCAT CGCACTCACG
GGCCCCAGCG GCAGCGGTAA AAGCACACTG CTAAATTTGA TCGCAGGCTT TGAAACGCCA
GACAGCGGCC AGATAGTGTT GAACCATCAA TCCACCCAAG ATTGGCAAGA CAAACACTGG
AGCGAGTTCA GGCGCAACCA TTTGGGCGTG GTGTTTCAAC AATTTAATCT GCTGACTCCG
CTCAATGTGA GAAACAACAT AGGTTTTTCA CTCAATCTCA ACGGCGCCAG TTGGAATCCT
TGGTGCGATT ATCTCGTCGA CAAATTGGGG CTGGCTTCGT TGCTCAATCG GCAGGTCGAA
GCGCTTTCAG GCGGGCAACA GCAAAGGGTC GCTATCGCCA GAGCCTTAGC CCACAACCCG
AGTTTACTGC TGGCCGACGA ACCCACGGGT AACCTCGATG ATGAATCGGG CAAACAGGTG
ATGTCGCTGC TGTGCGAACT GGCCAAAGAA AGCCAAACCA GCATACTCAT GGTCACCCAC
AGTGAAGAAT GCGCCGCTTT TATGCACAAA CGCTGGCATC TTTCCCACGC CGCTGTGTCA
ATCTCCGGTT AA
 
Protein sequence
MSEVAKLIQV SKSFRDGEQR HTVLQAVDLT LHRGETIALT GPSGSGKSTL LNLIAGFETP 
DSGQIVLNHQ STQDWQDKHW SEFRRNHLGV VFQQFNLLTP LNVRNNIGFS LNLNGASWNP
WCDYLVDKLG LASLLNRQVE ALSGGQQQRV AIARALAHNP SLLLADEPTG NLDDESGKQV
MSLLCELAKE SQTSILMVTH SEECAAFMHK RWHLSHAAVS ISG