Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3299 |
Symbol | |
ID | 4255395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3902933 |
End bp | 3903352 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638123982 |
Product | curlin-associated protein |
Protein accession | YP_739339 |
Protein GI | 114048789 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.518948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCAACAT TACCTTATCG TATATGTGCT TGGTTAGGAT TCGCGTTCTA TTGCTTTGTC GGCATGGGCC AAGTGAATGC CCAAGAACTT TCTCTTAACT TACAAGCATT GCTGGAACGC TCAGGAAGAG ACAACCTCAT CACCTTCATT CAACAAGGAA ATATCAACAT TGGAGGTGTG CTCCAAGCAG GTAACGACAA TAGTGCTTAT CTCATTCAGC AAGGCAATAA CAATAACGCC ATTGTTATAC AGGTAGGGAT TGAGAATGAA GTTCAATTGC AGCAAGCAGG TAACAGTAAC TCAGCGTTAA TTACGCAGTG GGGTGATGCC AATTTAGTTC AACTGAATCA GACCGGCAGT AACAATTTTT CCATCACACA GATTGCAGAT AATGCTGCAA TTTCAATTAC GCAATACTAA
|
Protein sequence | MSTLPYRICA WLGFAFYCFV GMGQVNAQEL SLNLQALLER SGRDNLITFI QQGNINIGGV LQAGNDNSAY LIQQGNNNNA IVIQVGIENE VQLQQAGNSN SALITQWGDA NLVQLNQTGS NNFSITQIAD NAAISITQY
|
| |