| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3275 |
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| Symbol | |
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| ID | 4255145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3879365 |
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| End bp | 3880804 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123958 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_739315 |
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| Protein GI | 114048765 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGC GGGTTACCCA CCACAGGATA TTCGCCTTGA GCAATTCAGA CACTCAGCCT
TCAATGGCTT TCTCGACTCT TAAGCTAAAA CCCGAACTGC TTGAGAACCT TACCACTATG
GGCTATCACG AAATGACGCC AATTCAGGCG CAGAGTCTGC CAGCCATTTT AGCGGGCGAG
GATGTGATTG GTCAGGGTAA GACGGGTTCG GGTAAAACGG CGGCCTTCGG GCTAGGTCTG
CTGAACAAGT TAGATGTGAA GCGTTTTCGC ATTCAAACCT TAGTGCTGTG TCCGACCCGT
GAACTGGCCG ACCAAGTGGC GCAGGAGATC CGCACACTGG CGCGTGGTAT TCACAACGTA
AAAGTGCTCA CCCTCTGCGG CGGCGTGCCT ATGGGGCCGC AAATTGGTTC ACTCGAGCAT
GGCGCCCACA TTATCGTCGG TACGCCGGGG CGGATTGTCG ATCACTTAGA GCGTAACCGT
TTAGACCTAA GCAACCTGAA TATGCTCGTG CTTGACGAAG CCGACCGTAT GCTGGAAATG
GGCTTCCAAC CTCAGCTCGA TGCGATTATC GAACAGTCGC CACGCGAGCG CCAAACTCTG
TTGTTTAGCG CAACCTTCCC CGAGCAGATT CAGTCGATTG CTAAGCAAAT CATGTACGAC
CCTGTGATGG TGAAAGTGGC CGTGACCCAC GAAAAGAGCA CCATCGAGCA GCATTTCTAC
CACTTGGATG ACGACAAGGC GCGCATGCAG GCGCTGCAAT TATTGCTGCT GGATCGTAAG
CCAGAGAGTG CGGTGGTGTT TTGTAATACC AAGCGCGAAA CCCAAAAAGT GGCCGATGAA
CTGAGCGATG CAGGCTTTAG CGTTATCGCC CTGCACGGCG ACTTAGAGCA GCGTGACCGG
GATGAAACCC TGCTGCAATT TGCTAACAAG AGTGCCTGTG TGTTGGTGGC TACCGACGTG
GCCGCCCGTG GTTTAGATAT CGATGCGCTA GATGCGGTAT TTAACTACCA TGTGGCCTTT
GACACCGAAG TGCATATTCA CCGTATTGGC CGTACCGGCC GTGCGGGCAG TAAGGGCGCT
GCTTTTACCT TCTTTGACGA TCAAGATGGC TACAAAATTG CGTTATTAGA AGAGTACTTA
GAGCGCGATA TTCAGAGTGA AGCCTTACCA TCATTAAGTT TGCTGGGTAC TGCGCCCAAT
GCGCCAACCA TGATCACCCT GCAAATCGAT GGCGGTAAAA AAGAGAAGCT TCGCCCCGGC
GATATCCTCG GTGCCCTCAC TGGGGAGAAT GGTATCGAAG GCTCGCAGGT CGGCAAAATC
CTTGTGACCG ATTACCGCGC CTATGTGGCG GTGAATCGTA AAGTCGCTAA AAAGGCGCTG
AGCAAAATCA CCAGTGGCCG CATTAAAGGC AAGTCCTACC GCGCGTGGTT AATGAAATAA
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| Protein sequence | MPARVTHHRI FALSNSDTQP SMAFSTLKLK PELLENLTTM GYHEMTPIQA QSLPAILAGE
DVIGQGKTGS GKTAAFGLGL LNKLDVKRFR IQTLVLCPTR ELADQVAQEI RTLARGIHNV
KVLTLCGGVP MGPQIGSLEH GAHIIVGTPG RIVDHLERNR LDLSNLNMLV LDEADRMLEM
GFQPQLDAII EQSPRERQTL LFSATFPEQI QSIAKQIMYD PVMVKVAVTH EKSTIEQHFY
HLDDDKARMQ ALQLLLLDRK PESAVVFCNT KRETQKVADE LSDAGFSVIA LHGDLEQRDR
DETLLQFANK SACVLVATDV AARGLDIDAL DAVFNYHVAF DTEVHIHRIG RTGRAGSKGA
AFTFFDDQDG YKIALLEEYL ERDIQSEALP SLSLLGTAPN APTMITLQID GGKKEKLRPG
DILGALTGEN GIEGSQVGKI LVTDYRAYVA VNRKVAKKAL SKITSGRIKG KSYRAWLMK
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