Gene Shewmr7_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3246 
Symbol 
ID4256938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3847115 
End bp3847852 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content46% 
IMG OID638123929 
Producthypothetical protein 
Protein accessionYP_739286 
Protein GI114048736 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0192004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TACTGACCGC AGCACTATTA ATGACGGCAC CATTTATGGC GAATGCGGGA 
GCCGATTTTG TTAAAGGCGA TAGGACATTC GCAGGCGAAG CCGAGTTAGG TGCAACCTTA
ACCACAGGTA ACACCGATAC CTCATCCTAT AAGGGTCGCT TAAGCCTTAA ACATGAATTG
GGTGACTGGG AAAACCAATA TCTTTTAGAA GGTTTGTATA AAGAAGATAC GGGTGAAGTG
ACCGCTAAGC GTTATTTAGC GGGCGCACAG GGTAACTATA AAATGACAGA TCGCAGCTAT
CTGTTTGCCA ACGCTAACTA TGAAGTTGAC CCTTTTACCG GTTATGACTA TACAGCCTCT
GGGGCCGCGG GTTATGGTCA CAGACTCTAT GACACCAGCA AAACATTTTT AGATGTGGAA
ATCGGTCCCG GTTACATCTA TCAGCGCCTC GATTCAGAGC AAGCGCTGTT AGAAGGCACA
GATTCGAATG ACAGTGTGGT TGCCCACGGC GTGATCAACT TCGAAACTGA AATCACTGAA
ACCTCAAAAT TCCAGCAACG TTTTGTGGCC GACTACGGCG ATAAATTGGA TGCGCGTTCA
GAAACCTCGC TGACAGCCAA TATCATTGGC GCCTTGGCGA TGAAGTTTGC GATTATTGTG
CGCTACAACA GTGAGCCACT GGACGATAAA AAGAGCACTG ATACCGAAAC GAATATGACC
TTGCTCTATT CGTTCTAA
 
Protein sequence
MKKVLTAALL MTAPFMANAG ADFVKGDRTF AGEAELGATL TTGNTDTSSY KGRLSLKHEL 
GDWENQYLLE GLYKEDTGEV TAKRYLAGAQ GNYKMTDRSY LFANANYEVD PFTGYDYTAS
GAAGYGHRLY DTSKTFLDVE IGPGYIYQRL DSEQALLEGT DSNDSVVAHG VINFETEITE
TSKFQQRFVA DYGDKLDARS ETSLTANIIG ALAMKFAIIV RYNSEPLDDK KSTDTETNMT
LLYSF