| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3216 |
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| Symbol | |
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| ID | 4254973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3809699 |
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| End bp | 3810688 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123900 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein |
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| Protein accession | YP_739257 |
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| Protein GI | 114048707 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.489263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTG GATTTTTTAG CGCAAAACAC TACGACATGC AGCATTTTAA CCGTACAAAT
GCCGCATTTG GTGCGCAAAT TGAGTATTTC GATTATCGCC TCTGCATGCA AACCGTTAAG
CTTGCCGAAG GTTTTGAGGT GGTGTGCGCC TTTGTTAACG ATTCCCTCTG TGAAGAAGTG
TTGGTCGAGC TTGCCAAAGG TGGCACGAAA ATCATTGCCA TGCGCTGCGC GGGTTTTAAC
AATGTCGATT TAGTCGCCGC CAAACGCTTA GGCATGCAAG TGGTCAACGT GCCTGCCTAT
TCGCCGGAAT CTGTGGCCGA GCACACAGTC GCCTTAATGC TGACCCTAAA CCGCAAAATC
CATAAGGCCT ACCAACGCAC CCGTGATGCA AACTTCTCCC TCGAAGGCTT AGTCGGTTTT
AACATGTTTG GCAAAACCGT TGGCGTAATA GGCACAGGTA AGATTGGGGT CGCCACAATT
AAGGTATTGC TCGGTTTTGG CTGTAAAGTG ATTGCCTTTG ACCCTTACCC AAATCCTGCG
GTCGAAGCGC TCAATGTGGA ATATCAGGAT CTGGATACCA TTTACGCCAA CAGCGATATT
ATCAGCCTGC ATTGCCCATT AACCGCCGAT AACCACCATC TGCTGAATAA AGAAAGCTTT
GCCAAGATGA AACCGGGCGT CATGGTGATC AACACCAGCC GCGGCGGTTT GCTCAATGCC
TTCGATGCAA TGGAAGCCTT AAAACTCGGC CAGATTGGCT CCTTAGGGCT TGATGTGTAT
GAAAACGAAA AAGAATTATT TTTCGAGGAC AAGTCGAACC AAATCATTCA GGACGATGTG
TTCCGTCGCT TATCCGCCTG CCACAACGTG ATTTTTACCG GTCACCAAGC CTTCCTCACC
GAAGAAGCAC TGGGCGCGAT TGCACATACA ACCCTGAGCA ATGTCAAAGC CCTACTCGCG
GGCGAGCGCT CTGGTAACGA ACTGTTTTAA
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| Protein sequence | MRIGFFSAKH YDMQHFNRTN AAFGAQIEYF DYRLCMQTVK LAEGFEVVCA FVNDSLCEEV
LVELAKGGTK IIAMRCAGFN NVDLVAAKRL GMQVVNVPAY SPESVAEHTV ALMLTLNRKI
HKAYQRTRDA NFSLEGLVGF NMFGKTVGVI GTGKIGVATI KVLLGFGCKV IAFDPYPNPA
VEALNVEYQD LDTIYANSDI ISLHCPLTAD NHHLLNKESF AKMKPGVMVI NTSRGGLLNA
FDAMEALKLG QIGSLGLDVY ENEKELFFED KSNQIIQDDV FRRLSACHNV IFTGHQAFLT
EEALGAIAHT TLSNVKALLA GERSGNELF
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