| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3215 |
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| Symbol | |
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| ID | 4254972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3807663 |
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| End bp | 3809453 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123899 |
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| Product | flavocytochrome c |
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| Protein accession | YP_739256 |
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| Protein GI | 114048706 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.57421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACAA GAAAGATTCA AAAAACAGCA CTAGCCATGC TGATCTCTGG TGCGATGGCA
GGCACAGCCT ATGCCGCGCC AGAAGTACTA GCCGATTTTC ACGGTGAAAT GGGCGGCTGC
GATAGCTGCC ACGTATCAGA TAAAGGTGGC GTGACAAACG ACAACCTGAC CCATGAAAAC
GCCCAATGTG TTAGCTGCCA CGGTGATTTA AAAGAACTGG CTGCAGCGAC GCCAAAAGAT
AAAGTTTCTC CGCACAAATC TCACTTAATC GGTGAAATCG CTTGTACCAG CTGCCATAAA
GGCCACGAAA AATCAGTGAC TTACTGTGAC GCTTGCCACA GCTTCGGCTT CGATATGCCA
TATGGCGGCA AGTGGGAACG TAAATTTGTG CCTGTTGATG CAGACAAAGC GGCTCAAGAT
AAAGCCATTG CCGCTGGCGT GAAAGAAACC ACAGACGTCG TGGTTATCGG TTCGGGTGGT
GCAGGTCTTG CTGCCGCCGT TTCAGCCCGT GATGCTGGCG CGAATGTGAT TCTGTTAGAA
AAAGAACCTA TCCCAGGTGG TAACACTAAA CTGGCTGCCG GCGGTATGAA CGCTGCAGAA
ACTAAGCCAC AGGCTAAGTT AGGTATCGAA GATAAGAAAC AAATCATGAT CGACGACACC
ATGAAAGGTG GTCGTAACAT CAACGATCCT GAATTAGTGA AAGTCTTGGC CAACAACTCT
TCAGACTCTA TCGATTGGTT AACCGCTATG GGTGCCGACA TGACTGACGT GGGCCGTATG
GGTGGCGCAA GCGTTAACCG TAGTCACCGT CCAACCGGTG GTGCGGGTGT GGGTGCGCAC
GTTGCACAAG TGCTGTGGGA CAATGCCGTT AAACGTGGTA CTGACATTCG TTTAAACAGC
CGTGTTGTAC GCATCCTTGA AGATGCAAGC GGCAAAGTGA TCGGCGTTTT AGTGAAAGGT
GAATACACTG GCTACTATGT GATCAAGGCC GATGCAGTCG TGATCGCTGC CGGTGGTTTT
GCGAAAAACA ACGATCGCGT CGCTAAGTAC GATCCTAAGT TAAAAGGCTT TAAAGCGACT
AACCACCCAG GTGCAACCGG TGACGGCTTA GACGTTGCTC AGCAAGCGGG CGCCGCAACT
CGTGACTTAG AATACATCCA AGCTCACCCA ACTTACTCAC CAGCCGGTGG TGTGATGATC
ACCGAAGCGG TACGTGGTAA CGGTGCTATC GTGGTTAACC GTGACGGTAA CCGCTTCATG
AACGAAATCA CGACCCGAGA TAAAGCGTCT GCAGCGATTC TGCAACAGAA AGGCGAAAGC
GCTTACCTTG TATTCGATGA CTCTATCCGT AAGAGCTTAA AAGCCATCGA AGGCTATGTT
CACTTGAACA TCGTTAAAGA AGGCAAGACC ATCGAAGATT TAGCGAAACA ACTCGATGTG
CCAGCCGCTG AACTGGCGAA AACCGTCACT TCTTACAACG GTTTTGTGAA ATCAGGTAAA
GACACACAAT TCGAGCGTCC AAACCTGCCA CGTGAAATCG CCACTGCGCC TTTCTATGCC
TTAGAAATCG CACCAGCGGT TCACCACACT ATGGGTGGTA TCGTTATCGA TACTCAAGCC
GAAGTGAAGA GCGATAAAAC CGGTAAACCT ATCAGCGGTT TATACGCAGC TGGTGAAGTA
ACTGGTGGTG TTCACGGTGC TAACCGTTTA GGTGGTAACG CCATCTCTGA TATCGTGACC
TATGGCCGTA TCGCGGGTGC ATCTGCCGCG AAATACGCGA AAGACCACTA G
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| Protein sequence | MFTRKIQKTA LAMLISGAMA GTAYAAPEVL ADFHGEMGGC DSCHVSDKGG VTNDNLTHEN
AQCVSCHGDL KELAAATPKD KVSPHKSHLI GEIACTSCHK GHEKSVTYCD ACHSFGFDMP
YGGKWERKFV PVDADKAAQD KAIAAGVKET TDVVVIGSGG AGLAAAVSAR DAGANVILLE
KEPIPGGNTK LAAGGMNAAE TKPQAKLGIE DKKQIMIDDT MKGGRNINDP ELVKVLANNS
SDSIDWLTAM GADMTDVGRM GGASVNRSHR PTGGAGVGAH VAQVLWDNAV KRGTDIRLNS
RVVRILEDAS GKVIGVLVKG EYTGYYVIKA DAVVIAAGGF AKNNDRVAKY DPKLKGFKAT
NHPGATGDGL DVAQQAGAAT RDLEYIQAHP TYSPAGGVMI TEAVRGNGAI VVNRDGNRFM
NEITTRDKAS AAILQQKGES AYLVFDDSIR KSLKAIEGYV HLNIVKEGKT IEDLAKQLDV
PAAELAKTVT SYNGFVKSGK DTQFERPNLP REIATAPFYA LEIAPAVHHT MGGIVIDTQA
EVKSDKTGKP ISGLYAAGEV TGGVHGANRL GGNAISDIVT YGRIAGASAA KYAKDH
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