Gene Shewmr7_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3204 
Symbol 
ID4256233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3798211 
End bp3798927 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content48% 
IMG OID638123888 
Producttwo component transcriptional regulator 
Protein accessionYP_739245 
Protein GI114048695 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.294731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCG CGCCAATGCC TGAACCCCTA TCGCAAATCC TATTGATTGA AGACGACCTC 
CCCCTTGCCG AACTGGTCTG CACCTATTTA ACCCAAGAAG GCTATAAGCT TATCCATTTG
GATAATGCTG AAGATGCGCT CATTCGTCAG GATACCGATG ATTTTGATCT CATCATTTGC
GATGTCATGC TCCCAGGGCA GGATGGTTTT AGTATCTACC CGCAGCTTGC GGCCAGTTAT
CCCTGTCCAA TAATCTTCCT GACGGCGCTC GATAATCATG CCGACCAAAT TCGCGGATTA
AATCTAGGAG CCTGCGATTA CTTACTCAAA CCCGTTGTCC CTCCCCTGCT GTTGGCGCGG
ATTAAGGCCA ACCTGCGCAA ACAGCAATCC AGCAGCAGCC GCAGTAAGCT TAAGTTACAC
GACTTATTTT TAGACCCCAA CCTACAGCAG GTTAACCTTG GGGATGAAGC CTTATCCTTC
ACCACCAAAG AATTTTCACT GCTGTGGATC TTCGCCCTCC ATGCAGGCAA AGTGCTGTCG
CGGGAGTTTT TATTCGAACA GTTCGTCGGC CGCGAATATG ACGGTTTAGA CAGGGCCATA
GACTTAAAAA TCAGCCGACT ACGTAAACGC TTAGATGAGC TGAATGTACC GGGGTTAGCC
ATTACGACTA TTCACGGCAA AGGCTATTTA TTCAATTACT TACCTAAAAA AGGTTAG
 
Protein sequence
MTSAPMPEPL SQILLIEDDL PLAELVCTYL TQEGYKLIHL DNAEDALIRQ DTDDFDLIIC 
DVMLPGQDGF SIYPQLAASY PCPIIFLTAL DNHADQIRGL NLGACDYLLK PVVPPLLLAR
IKANLRKQQS SSSRSKLKLH DLFLDPNLQQ VNLGDEALSF TTKEFSLLWI FALHAGKVLS
REFLFEQFVG REYDGLDRAI DLKISRLRKR LDELNVPGLA ITTIHGKGYL FNYLPKKG