| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3184 |
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| Symbol | metH |
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| ID | 4256982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3759469 |
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| End bp | 3763203 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638123868 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_739225 |
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| Protein GI | 114048675 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAT CTCTCCATCG AGCCAGCCAA ACACTGGCAG ACATTCGCAA CCAGTTGTCA
AAGCGCATTC TGATTTTAGA CGGCGCCATG GGCACTATGA TCCAAGGCTA CAAGCTGGAA
GAAGCCGATT ACCGTGGCGA GCGTTTCAAG GATTGGCATA CCGACGTTAA GGGCAATAAC
GATCTTTTAG TGCTCACGCA GCCGCACATC ATCAAACAAA TTCACACCGA CTACCTATTA
GCCGGTGCCG ATATTATTGA AACCAACACC TTCAACGCCA CCACTATCGC CATGGCCGAC
TACGACATGC AGTCGCTGTC CGCCGAAATT AACCGTGAAG GCGCGCGCCT CGCCCGTGAG
GCCTGTGACG AAATCGAAAA AGCCACGGGG AAACCCCGTT ATGTTGCCGG TGTGTTAGGG
CCCACTAACC GCACTTGTTC TATCAGCCCC GATGTTAACG ATCCCGGATA TCGCAATATC
CACTTCGATG AGTTAGTGAC CGCTTACTGC GAATCGACCC GCGCCTTAAT TGAAGGCGGC
GCCGATATCA TTATGGTCGA GACCATCTTC GATACCTTAA ACGCTAAGGC CGCCTTATTT
GCCATCGAAA CCGTGTTCGA TGAACTCTTT GGGGCAAATT CACCAGCACG TTTGCCCGTG
ATGATCTCAG GCACCATTAC CGATGCCTCG GGCCGAACCC TGACCGGACA AACCACCGAA
GCTTTTTATA ACTCCCTTCG CCATATCAAG CCCTTGTCCA TCGGCCTTAA CTGCGCCCTC
GGCCCTAAGG AGCTGCGCCC CTACGTCGAA GAACTGTCGC GCATCGCCGA ATGTTATGTC
TCGGCGCACC CTAACGCGGG TCTACCAAAC GAGTTTGGCG GTTACGATGA AACCCCAGAA
GATATGGCGA GCGTTATCCA AGAATGGGCC AGTGAAGGCA TGCTCAACAT TATCGGCGGC
TGCTGTGGTA GCACGCCCGA GCATATTAAG GTCATTCGCG AAGCCGTTGA GCCGTTTGCG
CCACGGGTAC TACCCGAGAT CCCCGTCGCC TGCCGTTTAT CGGGTTTGGA ACCGCTCACT
ATCGACGCCC AAACCCTGTT TGTGAACGTG GGTGAACGTA CCAACGTTAC TGGCTCGGCC
AAGTTCTTAA AGCTGATCAA AGAAGGTAAA TTCGAGCAGG CGCTCGATGT CGCCCGTGAA
CAGGTAGAAA GCGGCGCGCA GATCATCGAC ATCAACATGG ATGAAGGCAT GCTCGATGGT
GTGGAGGTGA TGCATAAGTT TTTAAATCTT ATCGCCTCTG AGCCGGATAT CAGCCGTGTA
CCGATTATGA TCGACTCCTC TAAGTGGGAG GTGATTGAAG CGGGCCTCAA ATGTATTCAA
GGCAAGGGAA TCGTCAACTC TATCTCCTTG AAGGAAGGCG AGGAGAAGTT TATCGAGCAG
GCAACCCTAG TTAAACGCTA CGGCGCAGCG GCCATTATTA TGGCGTTCGA CGAGCAAGGT
CAGGCCGACA CTAAGGCGCG TAAAGTCGAG ATCTGTACCC GCGCCTACCG CGTACTGGTC
GATAAGGTCG GCTTTCCGCC CGAAGACATT ATCTTCGACC CGAATATCTT CGCCATCGCC
ACGGGTATCG ATGAGCACGA TAACTATGCC GTCGATTTTA TTGAAGCCAT TAAAGAGATT
AAGGCCACCC TGCCCCACGC GATGATTTCC GGCGGGGTGT CGAACGTGTC GTTCTCCTTC
CGCGGTAACA ACCCTGTGCG TGAGGCCATT CACGCGGTGT TCCTGTACCA CGCGATTAAA
GTCGGCATGG ACATGGGTAT CGTCAACGCG GGCCAATTAG CGATTTACGA TGATATCGAC
CCCGAACTTA AGGATAAGGT CGAGAACGTC GTGCTCAACC TGCCTTGTCC TGTTGAAGGC
TCAAACAATA CCGAGCAATT GCTTGAGATT GCTGAAAAAT TCCGTGGCGA TGGCTCAAGT
GCCGCCAAGA AAGAAGACTT AGAATGGCGC TCATGGCCAG TTAATCAACG TCTCGCCCAT
GCGCTGGTCA AAGGCATCAC CGAATTTATC GACGAAGATA CTGAAGCGGC TCGTCAGCTC
GCCTCCCGTC CGCTGGATGT GATTGAAGGC CCGTTGATGG ACGGTATGAA TATCGTCGGC
GACCTGTTTG GCTCGGGCAA AATGTTCCTG CCACAGGTGG TGAAGTCGGC GCGGGTGATG
AAAAAGGCCG TAGCCTACCT CAACCCCTTT ATCGAGCAAG AGAAGGTCGA AGGCCAATCT
AACGGCAGAA TTTTGATGGT GACGGTTAAG GGCGATGTGC ACGATATCGG CAAGAATATT
GTCGGCGTGG TGCTCGCCTG TAACGGCTTT GAGGTATTCG ATTTAGGCGT GATGGTGTCG
GTGGAGCGCA TTCTCGAAGC AGTGAAAGAG CACAATATCG ACATTATCGG CATGTCTGGG
CTTATCACCC CAAGCCTCGA TGAGATGGTG CACAATGTGA AAACCTTCCA CCGTGAAGGC
CTCACCATTC CGGCGATTAT CGGCGGCGCG ACCTGCTCGA AAATCCATAC CGCGGTGAAG
ATTGCGCCCC ATTATCCCCA TGGCGCGATT TACATTGCCG ACGCCTCGCG CGCCGTGCCT
ATGGTCAGCA AGCTGGTGAG CAATGAAACT CGCCAAGCCA CTATCGATGA GACCTACGCC
GAATACGAAG AGATGCGCGT TAAGCGTTTA TCGCAAACCA AGCGTAAGGA AATTGTCTCG
CTGGAAGCCG CCCGCGAAAA CCGCTGCCAG CACGACTGGG CAAACTACAC CCCGTTCAAG
CCCAATGTGC TGGGTCGCCA AGTATTTGAA GACTATCCAT TAACCGACTT AGTCGACCGT
ATCGACTGGA CGCCGTTCTT CCGCGCTTGG GAGCTACACG GCCATTACCC TGAGATCTTA
ACCGACAAGG TAGTGGGGGT TGAGGCGCAG AAACTGTTCG CCGATGGTCA GGCCATGCTT
AAGAAAATCA TCGATGAAAA ATGGCTTACC GCCAAGGGCG TGATTGGGCT ATTCCCCGCC
AATACTGTCG GCTTCGATGA TATTGAGCTC TATACCGACG AGACTCGCAC CGAAGTCGAA
ATGACTACCC ATCACCTGCG GATGCAGCTT GAGCGTGTGG GTAACGATAA CTTCTGTCTG
GCCGACTTTG TGGCGCCAAA GGACAGCGGC GTTGCCGACT ATATGGGCGG TTTTGCCGTG
ACCGCAGGCC ATGGTATCGA TGAGCATATC GCCCGCTTTG AGGCCAACCA CGATGACTAC
AACGCCATTA TGCTCAAGTG CTTAGCCGAC CGTTTAGCCG AAGCCTTTGC CGAGCGGATG
CACGAGCGCG TGCGTAAGGA ATTCTGGGGT TATGCCGCCG ATGAGCAGCT CGATAACGAA
GCCTTAATTC GTGAGAAATA CAAAGGGATC CGCCCCGCAC CGGGTTACCC CGCCTGCCCG
GATCACACCG AAAAAGGCCT GCTGTGGGAA CTGTTAAAGC CGAATGAAAC CATCGACTTA
AACATTACCG AAAGCTACGC CATGTTCCCC ACCGCAGCGG TATCGGGCTG GTACTTTGCC
CACCCGAAAT CCCGCTACTT TGGCGTGACC AATATTGGTC GCGATCAGGT AGAGGATTAC
GCTAAGCGTA AGGGGATGAC TGTTGCAGAG ACGGAGAAGT GGCTAGCGCC AGTACTTGAC
TATGATCCCG AGTGA
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| Protein sequence | MAISLHRASQ TLADIRNQLS KRILILDGAM GTMIQGYKLE EADYRGERFK DWHTDVKGNN
DLLVLTQPHI IKQIHTDYLL AGADIIETNT FNATTIAMAD YDMQSLSAEI NREGARLARE
ACDEIEKATG KPRYVAGVLG PTNRTCSISP DVNDPGYRNI HFDELVTAYC ESTRALIEGG
ADIIMVETIF DTLNAKAALF AIETVFDELF GANSPARLPV MISGTITDAS GRTLTGQTTE
AFYNSLRHIK PLSIGLNCAL GPKELRPYVE ELSRIAECYV SAHPNAGLPN EFGGYDETPE
DMASVIQEWA SEGMLNIIGG CCGSTPEHIK VIREAVEPFA PRVLPEIPVA CRLSGLEPLT
IDAQTLFVNV GERTNVTGSA KFLKLIKEGK FEQALDVARE QVESGAQIID INMDEGMLDG
VEVMHKFLNL IASEPDISRV PIMIDSSKWE VIEAGLKCIQ GKGIVNSISL KEGEEKFIEQ
ATLVKRYGAA AIIMAFDEQG QADTKARKVE ICTRAYRVLV DKVGFPPEDI IFDPNIFAIA
TGIDEHDNYA VDFIEAIKEI KATLPHAMIS GGVSNVSFSF RGNNPVREAI HAVFLYHAIK
VGMDMGIVNA GQLAIYDDID PELKDKVENV VLNLPCPVEG SNNTEQLLEI AEKFRGDGSS
AAKKEDLEWR SWPVNQRLAH ALVKGITEFI DEDTEAARQL ASRPLDVIEG PLMDGMNIVG
DLFGSGKMFL PQVVKSARVM KKAVAYLNPF IEQEKVEGQS NGRILMVTVK GDVHDIGKNI
VGVVLACNGF EVFDLGVMVS VERILEAVKE HNIDIIGMSG LITPSLDEMV HNVKTFHREG
LTIPAIIGGA TCSKIHTAVK IAPHYPHGAI YIADASRAVP MVSKLVSNET RQATIDETYA
EYEEMRVKRL SQTKRKEIVS LEAARENRCQ HDWANYTPFK PNVLGRQVFE DYPLTDLVDR
IDWTPFFRAW ELHGHYPEIL TDKVVGVEAQ KLFADGQAML KKIIDEKWLT AKGVIGLFPA
NTVGFDDIEL YTDETRTEVE MTTHHLRMQL ERVGNDNFCL ADFVAPKDSG VADYMGGFAV
TAGHGIDEHI ARFEANHDDY NAIMLKCLAD RLAEAFAERM HERVRKEFWG YAADEQLDNE
ALIREKYKGI RPAPGYPACP DHTEKGLLWE LLKPNETIDL NITESYAMFP TAAVSGWYFA
HPKSRYFGVT NIGRDQVEDY AKRKGMTVAE TEKWLAPVLD YDPE
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