Gene Shewmr7_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3175 
Symbol 
ID4256973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3749697 
End bp3750734 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content52% 
IMG OID638123859 
Producthypothetical protein 
Protein accessionYP_739216 
Protein GI114048666 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC GTATTGTGAT TTGTGCCGAC GGAACTTGGA ATCGGCCAGA GAAAGACCTT 
AAGGTGGATT TTCCCACTAA TGTGCTGCGT CTGGCGCGGG CCATCAGCCC TATGGCGGCC
GATGGAAAAC CCCAGCAGGT GTTTTACGAC TGGGGCGTTG GCTCCTATTA CGATCAAGCC
ATTGGCGGCG CGACGGGGCG TGGGCTGCAC AAAAATATCA TGGATGGTTA CCGCTATTTA
GTGCAGAACT ATTCCCCCGG TGATGAGATC TATCTGTTTG GCTTTAGCCG AGGCGCTTAC
ACAGTGCGCT GTTTATGTGG CCTTATCAAT AATTGCGGCA TCCTCAAGCG TCCCGATGCG
AGGCTTATTC AACAAGCCTT TGACCACTAT AAAAAAAGCA GCGCGCCCTT TGCCCCAAGC
GGCGATAAAT CCGTTGAATT TAGACAACAG CACAGCCACG AATCGCGGGA GATTAAGTTT
GTTGGCGTGT GGGATACGGT GGGCGCCATG GGGATCCCGA TTTCGTTTCT CGGCTTATTC
GAAGATAAAG ACGAGTTTTA CGACACTAAG ATTGGCCGTA ATGTGCGGGT TGCCCGCCAT
GCCTTAGCGA TAGACGAACA TCGCAGCGAC TTCGAACCTA CGATTTGGCA AGTGCGCGAC
AATATGGATA TGCAACAGGT CTGGTTTGCC GGTGCCCATA GCAATATTGG CGGCAGCTAT
CTGCCAGATA AGGATGGCTC GCTATTGTCG GATAATGCGC TCGCGTGGAT GATGGCCGAG
GCTGAGCGAT TTAATTTGAG CTTAGAGCCG CACCTAGCGG CGAGTTTGCA TCCCAATCCT
TTGGCGACTT TACACGACTC GCGCCGCAGT TTTTACCGAA TTAAGCAATC TTATTTGCGC
CCAATTGACC CTAACGTCGC GCCCGTGTTG CTGCATCGCT CGGTGAAAAC CCGCTGGGAT
CAAGACCCTA AATATCGGCC TAAAAACCTG CAGACCTACC TTGAGCAGTA CGGCTGGCCA
GAAGAATTCA TCGATTAA
 
Protein sequence
MNKRIVICAD GTWNRPEKDL KVDFPTNVLR LARAISPMAA DGKPQQVFYD WGVGSYYDQA 
IGGATGRGLH KNIMDGYRYL VQNYSPGDEI YLFGFSRGAY TVRCLCGLIN NCGILKRPDA
RLIQQAFDHY KKSSAPFAPS GDKSVEFRQQ HSHESREIKF VGVWDTVGAM GIPISFLGLF
EDKDEFYDTK IGRNVRVARH ALAIDEHRSD FEPTIWQVRD NMDMQQVWFA GAHSNIGGSY
LPDKDGSLLS DNALAWMMAE AERFNLSLEP HLAASLHPNP LATLHDSRRS FYRIKQSYLR
PIDPNVAPVL LHRSVKTRWD QDPKYRPKNL QTYLEQYGWP EEFID