Gene Shewmr7_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3136 
Symbol 
ID4255111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3714852 
End bp3716282 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content49% 
IMG OID638123820 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_739177 
Protein GI114048627 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA GTGACACCCA ACACAGAGAG AACGCCAAGC GCCCCTCTGC CGAGCAATTT 
ATCCCCGTAC AAAATATCCA GGCGGACGAC AAACCAGCCC CCGTGAATGG TCAGATTCAT
TTCCGAGAGC AGAAGGGTTA TTTTCAGCGC CTAAGAACCA CAATGAATAG CCTGTTAGTT
CTGCTGTTTT TTGCCCTGCC CTTTATTTCC TTTGATGGTC GGCAAGCGAT ATTGCTGGAT
GTGAGTCAGC AGCAGTTCTT CTTTTTTGGC CTCACCCTCT GGCCACAGGA TTTCACCTTA
CTCGCTTGGG TATTTATTGC CGCCGCCTTT GGGTTGTTTT TCATTACTGT GTTTTGGGGG
CGCGTCTGGT GTGGCTATCT TTGCCCGCAA ACCGCGTGGA CTTTTATGTT TGTCTGGCTC
GAGAGCCGAA TTGAGGGCAA CAGCAACAAA CGTAAATTGC TCGATAAGGC GCCGTGGTCA
GCCAATAAAC TCGGAAAAAG AAGTCTCAAA CACGGCCTGT GGGGGTTAGC CGCCTTAATT
ACTGGCTGTG GATTTATCGG TTATTTCATC CCCGCACGCG AACTCTATTT AGATATTTTT
ACCGGCAACG CCGGCTTTTG GACGACCTGC TGGGTATGGT TTTTCGCGAT TTGCACTTAC
TTAAATGCAG GCTGGATGCG CGAGCAAATG TGCTTACACT GTTGCCCCTA CGCGCGTTTT
CAGGCCGTCA TGTTCGATGC CAACACCAAA ACCGTGACCT ATGATGCCGC TCGCGGCGAA
GCACGCGGCC CACGTAAGCG CAAACAACAG ACTGAACTCG GTGATTGTGT TGACTGTAAC
TTATGTGTCG AAGTCTGCCC AACGGGGATT GATATTCGCC AAGGCCTACA ATACGAGTGC
ATTAACTGCG GCGCCTGTGT CGATGCCTGT AATGAAACCA TGCAAAAATT CGACTACAAA
CAAAACCTAA TTAGCTATGT CAGCGAGAAT GAATTAAAGG GCATCACCCA TTCCAACTGG
CGCTCGCCAC GCTTTTTAGG TTACGGCGCC GCCGTTGTCA TTATGTTGGT TGTGATAGGT
TTAGATCTCT CCAGTCGCAG TGAAATTCAG CTTAACGTCA TTCGCGACAG ACAGAGCCTG
TATCGCGAAA CCGCCGATAA CAAAGTTGAA AATACCTACC AACTGAAGAT CCGCAACAAG
ACTCAGCAAA CCAAGCAATA TCAACTCGCG GTCAACAGCG AAATGCCCTT CAGCTTAATT
GCCGACCCTG TCATTACCCT TGCTCCGGGC GAGCAATCCG ATTATCCCGT GACAGTATTA
GCCGACAAAG ATGCAATCCC AACGGGACGC AAAATTATCA AATTCTCGGT AACGGATGTG
AGCAAACCTC AACAAAGCGT TAGCCAAGAA ACCGGCTTCT TTAGCCCTTA G
 
Protein sequence
MPKSDTQHRE NAKRPSAEQF IPVQNIQADD KPAPVNGQIH FREQKGYFQR LRTTMNSLLV 
LLFFALPFIS FDGRQAILLD VSQQQFFFFG LTLWPQDFTL LAWVFIAAAF GLFFITVFWG
RVWCGYLCPQ TAWTFMFVWL ESRIEGNSNK RKLLDKAPWS ANKLGKRSLK HGLWGLAALI
TGCGFIGYFI PARELYLDIF TGNAGFWTTC WVWFFAICTY LNAGWMREQM CLHCCPYARF
QAVMFDANTK TVTYDAARGE ARGPRKRKQQ TELGDCVDCN LCVEVCPTGI DIRQGLQYEC
INCGACVDAC NETMQKFDYK QNLISYVSEN ELKGITHSNW RSPRFLGYGA AVVIMLVVIG
LDLSSRSEIQ LNVIRDRQSL YRETADNKVE NTYQLKIRNK TQQTKQYQLA VNSEMPFSLI
ADPVITLAPG EQSDYPVTVL ADKDAIPTGR KIIKFSVTDV SKPQQSVSQE TGFFSP