Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3113 |
Symbol | |
ID | 4257154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3693767 |
End bp | 3695071 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123797 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_739154 |
Protein GI | 114048604 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.980889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCA GTAAACATCT GATTTTTGCT TTATTTGCAC TCGCTATCAG CCAGCCTACA ATGGCCGCTC CCCAGCCAAT CGACCGTGTT GCCGTTCAAA TCAACGACGG TATTGTGCTC GAAAGTGAAA TCACCAATAT GATTGACACT GTAAAAGCCA ATGCGAGAGC CGCGAATCAA TCGTTGCCAT CCGACAGTGC ACTGCGTACT CAGGTTATCG AGCGACTGAT CCTCACCCGT TTGCAGTTGC AGATGGCGGA TCGTATCGGT CTGCATATCG GTGACTTACA GTTAGACCAA GCAATTGAAA ACATTGCCCG CGAACAAAAA ATGACCGTGG CGCAAATGCA GCAAAAAATC GAGAGCGAAG GGTTAAGCTT CGGCCAATAC CGTGAGCAAC TGCGTGAAGA AATCACTCTA GGTGAAATCC AACGTATTCA AGTACAGCGC CGTATCCAAG TGTCACCACA GGAAATCACC GGCCTGGTAA AACTGATCCA AGAGCAAGGC ATGAAGGACG TCGAATACCA AATCGGCCAT ATTCTGATTG ACGTACCGAA CAACCCAAAC AGTGAACAAC TGGAAGCCTC GAGCAAGCGC GCAAATGCCG TACTCGAGCG TTTAAAGAGT GGTGAGGATT TCCGCCGCAC CGCAATCGCC TCTTCATCGG GTCCTAAGGC GCTGGAAGGC GGTATCTGGG ATTACATGAA CATCAACGAG ATGCCAACGC TGTTTGCTGA AGTCATCAAC GGTGCGAAAA AAGGCGATAT TATCGGCCCA ATCAAGAGTG GCGCCGGTTT CCACATTATC AAGATCATGG ATGCCCGTGG CTTACAGACT AAAGAAATTG AAGAAGTCAG AGCGCGTCAT ATCCTGCTCA AGCCATCGCC AATTCTGTCT GAAGACCGCG CTAAGGCCAT GCTGGAACAG TTCCTTAAGC AAATTCGCTC TGGCGAAGCC AAGTTTGAAG ATTTAGCCCG TCAGTACTCT GAAGATCCAG GTTCAGCCAC TAAAGGTGGT GAGCTAGGCT GGGCAGAGCC AAGCATTTAC GTGCCAGAGT TTGCCCAAAC CCTGAATAGC TTAAGCCCAG ATCAGATCAG TGAGCCTTTC CGTACCACCC ACGGCTGGCA TATCACTCAG CTGGAAGAGC GCAGAAAAAC CGATGCCACG GATCAATTTA ATACTAACCG TGCACACCAA CTGATCTTCC GTCGCAAATT TAATGAAGAA CTGCAAAACT GGCTAGACGA AATGCGTGCC GACGCATACA TTGAAGTCTT TCAGCCTGAG TCGAACCGAG GTTAA
|
Protein sequence | MKPSKHLIFA LFALAISQPT MAAPQPIDRV AVQINDGIVL ESEITNMIDT VKANARAANQ SLPSDSALRT QVIERLILTR LQLQMADRIG LHIGDLQLDQ AIENIAREQK MTVAQMQQKI ESEGLSFGQY REQLREEITL GEIQRIQVQR RIQVSPQEIT GLVKLIQEQG MKDVEYQIGH ILIDVPNNPN SEQLEASSKR ANAVLERLKS GEDFRRTAIA SSSGPKALEG GIWDYMNINE MPTLFAEVIN GAKKGDIIGP IKSGAGFHII KIMDARGLQT KEIEEVRARH ILLKPSPILS EDRAKAMLEQ FLKQIRSGEA KFEDLARQYS EDPGSATKGG ELGWAEPSIY VPEFAQTLNS LSPDQISEPF RTTHGWHITQ LEERRKTDAT DQFNTNRAHQ LIFRRKFNEE LQNWLDEMRA DAYIEVFQPE SNRG
|
| |