Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3107 |
Symbol | |
ID | 4257148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3686796 |
End bp | 3687749 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638123791 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein |
Protein accession | YP_739148 |
Protein GI | 114048598 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.583334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG TCGTACTCGA TGGTGAAACC TTAAACCCTG GGGATTTAAC TTGGCAAGCG GTCAGCGCAT TAGGGGAATT TAGCTGTTTT GCCCGCACGC CTTTGGCGGA GATTATCCCC CGCGCTCAGG ATGCCGAAAT TGTGCTCACC AACAAGACGC CCCTCGATGC CAACACCTTA GCCCAACTGC CTAAGCTTAA ATATATCGGT GTGCTCGCCA CGGGCACTAA CGTGGTGGAT CTTGCCGCCG CAAAAGAGTT AGGCATAGTG GTTACCAACG TGCCGGCCTA TGGCCCCGAT GCCGTCGCAC AAATGGTGTT TGCCCATATT TTGCATCACA CGCAAGCCGT TGCGGCGCAC CATCAAGCCG TTGCCGCAGG GCAGTGGAGC AATTGCAGTG ACTTTTGTTT TACCCTAATG CCGCTGCAAT CCCTTAAAGG CAAAACCTTA GGCTTGATTG GTTATGGGGA TATTGGCCAG CAGGTGGCTA AACTCGCCTT AGCCTTTGGC ATGAAGGTAT TAGTGAATAC CCGCACCAAA CCTAGCGATT TACCCCAAGG CGTGAGTTGG ACATCCCGCG ATACGGTATT CAAGGAGTCC GATATTCTCT CGCTCCATTG TCCATTCACC CCTGAGACCA CCGAGCTAAT TAACACTCAA ACCCTCGAAT TAATGAAGCC GCAGGCGTTA CTGATCAACA CCGCACGCGG CGGCTTAATC GATGAGGCGG CGCTTGCGGC CGCATTAACG CAGGGCAAAG TTTTTGCCGG CGTCGATGTA CTCTCGACCG AACCACCGAG TGCGGATAAT CCGCTACTAA CAGCGCCCAA TATCAGTATC AGTCCCCACA ATGCTTGGGC GACCAAAGAA GCGCGGCAGA ACTTACTTAA TATCGCAACG GCAAATCTCA GCGCTTATTT AGCTGGCGAT AGAGTTAATT GGGTGAATCC ATAA
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Protein sequence | MKIVVLDGET LNPGDLTWQA VSALGEFSCF ARTPLAEIIP RAQDAEIVLT NKTPLDANTL AQLPKLKYIG VLATGTNVVD LAAAKELGIV VTNVPAYGPD AVAQMVFAHI LHHTQAVAAH HQAVAAGQWS NCSDFCFTLM PLQSLKGKTL GLIGYGDIGQ QVAKLALAFG MKVLVNTRTK PSDLPQGVSW TSRDTVFKES DILSLHCPFT PETTELINTQ TLELMKPQAL LINTARGGLI DEAALAAALT QGKVFAGVDV LSTEPPSADN PLLTAPNISI SPHNAWATKE ARQNLLNIAT ANLSAYLAGD RVNWVNP
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