Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3085 |
Symbol | |
ID | 4256430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3662573 |
End bp | 3663436 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638123769 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_739126 |
Protein GI | 114048576 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00416947 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.497411 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGAA CACTGTTTAT CTTACTCACC GCACTTAGCC TGCCTTCAAT AGGAATGGCG AAGGAACCGT GCGTCACTAA AGATGAATGC ATCGAAATGC GTAACTGGGA TTTAGGCGTG GCGGTCGGCT GGGGACAAAA GACCAATCCA CTGCGGGATT TTGATGATAT TCCAGTCTTT TTTATCCCTA CCGTAGCTTA CTATGGTGAA CATTGGTTTT TTGATAACGG TAACTTAGGT TTCAGCTTAA CCGAGCAGAA ATACTTCAGT TTAAACTTAG TGACCAGCTA TAGCTTAGAT AGAGCCTACT TTTACCGCTG GGATCCATCG AACATCTTCC TGAAACGCAG CTCACAGGAA GAGGCAAGAC TGCTCGCCAC CAATACTGCC CTCAGCACTG AACCCGATCC CGTGTTTAAC TCCTTAGAAT CGCGAAACTT TACCATGCTG GGCGGCGCAG AAGCCTTTAT TTATAGCCCG TTAGGTGTAG TTAGATTAGC CTACACCCAT GATATGTTTA ATGTGCACCA AGGCGCCGAA GCGCAAATAA AATGGACCTA TGGCTGGCAT TTAACCCACT GGGTCATGGA TATGTCGCTC GTGTTTGATT GGAAAAGTAC TAATGTCGTC GACTATTACT ATGGTGTACG TCCGAGTGAA AATGCTTATT GGAGCCAACA TTACCATGCA GATGCTGGTT GGAATAAAGG GATAGAAATG ACGGCCCGTT ATATCTTAAC TGATAACTGG GATATGCTTT TTGCGTTTCG CTATACACAA CTTGCAGATG AAATTGCCGC CAGCCCCTTG CTCGATGAAG ACTATAGCAG CACATATTTT ATTGGCGCAG CGTATAGGTT TTGA
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Protein sequence | MYRTLFILLT ALSLPSIGMA KEPCVTKDEC IEMRNWDLGV AVGWGQKTNP LRDFDDIPVF FIPTVAYYGE HWFFDNGNLG FSLTEQKYFS LNLVTSYSLD RAYFYRWDPS NIFLKRSSQE EARLLATNTA LSTEPDPVFN SLESRNFTML GGAEAFIYSP LGVVRLAYTH DMFNVHQGAE AQIKWTYGWH LTHWVMDMSL VFDWKSTNVV DYYYGVRPSE NAYWSQHYHA DAGWNKGIEM TARYILTDNW DMLFAFRYTQ LADEIAASPL LDEDYSSTYF IGAAYRF
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