| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3068 |
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| Symbol | |
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| ID | 4255903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3638065 |
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| End bp | 3639900 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123746 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_739109 |
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| Protein GI | 114048559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.515821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAG TAAATTCGAT TGTGGCGTCT AAGCCATTAC AGTTAACCGA TGTCGTTTTG
AGGGATGCAC ATCAGTCTAT TTTAGCGACG CGTTTACGCA TTGATGACAT GCTTCCGATC
GCACCTCTGC TCGATAAAGT GGGTTTTTGG TCGCTCGAGT CTTGGGGCGG AGCAACCTTC
GATGCCTGTA TCCGTTATTT AGGTGAGGAT CCTTGGGACA GGATCCGCGA GCTGAAAAAA
TTGATGCCCA ATACACCGCA GCAAATGTTA CTGCGCGGTC AAAACCTATT AGGTTATCGC
CATTATGCTG ATGATTTAGT GACACGTTTT GTCGAGCGTG CCCATGCCTA TGGTGTGGAT
GTGTTCCGTA TCTTTGATGC GATGAATGAT GTGCGTAACC TTGAGATGGC GGTAAAAGCG
GTGCGTGACG TCGGTGGGCA TGCACAAGGC ACAATTTCTT ATACAACTAG CCCTGTTCAT
ACGGTTGATA CTTGGGTCGA TATGGCAAAG CGTCTTGAGG ACATGGGCTG CCATTCGCTG
TGCATTAAAG ACATGGCGGG CCTACTCAAG CCGATGGAAG CCTTTGAGCT AATTAGTCGC
TTAAAATCAC AAACTCAACT CATGCTATCA CTACATTGTC ACGCAACGAC TGGACTGAGC
ACTGCAACCT ATCAAAAGGC GATAGAGGCG GGAATTGATG TGCTCGATAC TGCTATTTCC
TCCATGAGCC AAACCTATGG CCATACGGCA ACTGAAACCG TGGTTGCCAT GGTGGCGGAG
ACCGAGCGTG AAACTCACTA TGACCTTGCC TTACTAGAAG AGATTGCCGC CTATTTCCGT
GAGGTGCGGA AAAAGTACGC CAAGTTTGAA GGGGCATTGA AGGGCATTGA TTCGCGTATT
CTTCGCGCTC AAGTGCCCGG TGGCATGTTG ACTAACATGG AGAGCCAACT TAAAGAGCAA
GGTGCAGCCG ATAAGCTCGA TGCTGTGCTG GAGGAGATCC CAAAGGTGCG TCAGGATTTG
GGCTTTCTGC CTTTGGTTAC ACCAACCTCG CAAATTGTTG GCTCGCAAGC CGTTATCAAC
GTACTGATGG GGCAAAGATA TCAATCGTTG ACCAAAGAGA CTGAAGGCGT GTTAAGGGGC
GAATATGGTG CTACTCCGGC TCCTGTTAAT CCCGAGTTGC AGGCTCGAGT GCTTAACGGT
GCGACAGCGA TCACCTGCCG TCCTGCGGAT TTACTCGCAC CCGAGTTGGA CAAACTGCGT
ACGGAGTTAT TATCAAAGGC GCAGGAGCAA GGGATTAGTC TCGTCTCAGA GAGCAAAGAA
AAGTCTCAGG ACGATGACTT ACTCATCTAC GCACTGTTCC CGCAGATTGG CTTACAGTTT
TTAAAGAGTC GTCACGATCC CTCGGCCTTT GAGCCAAAAC CTGAACTTGC GCCAGTGTTA
TCTGCTACGC CGCGTGAGGC CGAGATTTAT ACAGTCACGG TTGAGGGGCA AACTTATGTG
GTTGAGGTTG CCGAGGGCGG CGAAATTAGC CAGATCCAAG CTCAGGGGCA AGCCGCACTG
CCGCTTGGTC AAGCTTATCC TTCTCAGCCG AGCACTGCGC CAGTGCCTCA AACCAGTGAG
GTGAAACTTA AGATGAGCGC GCCCCTATCG GGCAATATCT TTAAAGTGCA CGTGGCCATA
GGTGACAAGG TTTGCGCCGG AGATGTGGTT ATCATCCTTG AGGCGATGAA AATGGAGACA
GAAATTCGCG CTCAGGGGGA TGGCATTATC ACCCACCTCT TTGTGAAAGA AGGGGATTCG
GTTGCCGTGG GTTCTCAATT ACTGGCCTTA GCCTAG
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| Protein sequence | MNRVNSIVAS KPLQLTDVVL RDAHQSILAT RLRIDDMLPI APLLDKVGFW SLESWGGATF
DACIRYLGED PWDRIRELKK LMPNTPQQML LRGQNLLGYR HYADDLVTRF VERAHAYGVD
VFRIFDAMND VRNLEMAVKA VRDVGGHAQG TISYTTSPVH TVDTWVDMAK RLEDMGCHSL
CIKDMAGLLK PMEAFELISR LKSQTQLMLS LHCHATTGLS TATYQKAIEA GIDVLDTAIS
SMSQTYGHTA TETVVAMVAE TERETHYDLA LLEEIAAYFR EVRKKYAKFE GALKGIDSRI
LRAQVPGGML TNMESQLKEQ GAADKLDAVL EEIPKVRQDL GFLPLVTPTS QIVGSQAVIN
VLMGQRYQSL TKETEGVLRG EYGATPAPVN PELQARVLNG ATAITCRPAD LLAPELDKLR
TELLSKAQEQ GISLVSESKE KSQDDDLLIY ALFPQIGLQF LKSRHDPSAF EPKPELAPVL
SATPREAEIY TVTVEGQTYV VEVAEGGEIS QIQAQGQAAL PLGQAYPSQP STAPVPQTSE
VKLKMSAPLS GNIFKVHVAI GDKVCAGDVV IILEAMKMET EIRAQGDGII THLFVKEGDS
VAVGSQLLAL A
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