| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3056 |
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| Symbol | |
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| ID | 4257306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3623419 |
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| End bp | 3625191 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123734 |
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| Product | putative sulfate transporter YchM |
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| Protein accession | YP_739097 |
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| Protein GI | 114048547 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.524026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.540816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCAC ACGTGTCACA CTCTGCTCAT TTGTTTTCAT TAAGAATTGC CCACGCCCTT
AGCGAGGCGT GCGTAAAAGA TAAGTATTCG GTTAAGCGTT TTGGACAAGA TCTACTGGCG
GGACTGACCG TCGGGATTAT TGCCATTCCG CTCGCAATGG CACTGGCGAT TGCCAGCGGT
GTCGCACCAC AATATGGCCT ATACACCGCC ATTGTCGGTG GTTTTATCAT TGCCATGACG
GGCGGCTCCC GTTATAGCGT GTCGGGACCA ACGGCCGCCT TCGTGGTCTT ACTCTATCCC
ATCGCCCAGC AATTTGGTTT GGCGGGACTG CTTATTGCCA CCGTAATGTC AGGCATGATG
TTGGTTGCCA TGGCCATGCT AAGACTGGGC CGATTAATTC TCTACATACC AGAGTCTGTC
ACCTTAGGTT TTACCGCGGG GATTGGAGTG GTGATTGCGA CCTTGCAGCT AAAAGACTTT
TTTGGCCTGC ATATAGAGCA CATGCCGGAG CAATATTTTG CCAAACTCAT GGCCTTAGGT
CAGGCATTGC CAAGCCTACA CTTGCCGAGC TTGCTAGTAG CCGCAGCCAC CTTAGCGACT
ATGCTACTCT GGCCTAAGTT GAAGATGCCT GTGCCAGCGC ATCTGCCCGC AATCGCCTTA
GGCAGTATTC TTGCCTTAGT GTTAAATACC ATGGGTGCAG ATATTGAAAC CATAGGGACA
CGTTTCCATT ATCAATTAAG CGATGGCAGT GTCGGCACCG GCATACCCGC TGTTTTACCC
CACTTTGAAT GGCCTTGGTT ACAAACGGGT GCCAATGGCC AAGCCTTTGA ATTTAATCTG
GCGACCTTTC AAGCCTTACT CCCTGCCGCC TTCGCGATTG CCATGCTAGG CGCTATTGAG
TCGCTACTGT GTGCCGTGGT ACTCGATGGC ATGACGGGAA AACGCCACAG CGCAAACAGT
GAACTCCTCG GCCAGGGTAT AGGTAATATT ATTACTCCCT TCTTTGGCGG TATCCCGGCA
ACGGCGGCCA TCGCCCGCAG CGCGGCAAAC GTTAAGGCGG GGGCCCAGAG CCCGATAGCA
TCGATGATCC ACGCCATTGT GGTATTGATT GGTCTAGTCG CACTCGCAGG GATTTTAGCC
TATTTACCCA TGTCGGCCAT GGCTGCATTA TTACTGGTCG TTGCATGGAA TATGAGCGAG
GCGCCTAAAG CGGTGCACTT ACTCAAAACC GCACCCACCA GCGATATCTT AGTGTTTTTA
ACCTGTTTTT CACTCACAGT GATTTTCGAT ATGGTGATCG CCATCAGCGT AGGGATTATC
TTAGCCGCCC TGCTGTTTAT GAAAGAAATT GCCGAGATGA CCAAGCTTTA TGATATCAGC
ACCAATAAGC GCTATGTCGA ACAACCACTC CCCCCCGACT GGGCGGTGAT AAAAATTAAC
GGTCCATTGT TTTTTGCCGC GGCCGACCGG ATTTTTGCCG AGATAGCGAG CCTTACCCAA
GATAAACAAG TGATAGTGCT TTACTTAGAT GGGGTATCAA TTCTCGATGC CGGTGGCCTT
GCCGCACTCA ATAAACTCAT TGATAAATGT AAACTTAACC ACACTAAACT GATTGTGGCC
GATCTGCAGT TTCAGCCCAT TCGTACCCTA GCGAGGGCCA AGGTGCAACC GATTGAAGGG
GTATTGAAGT TTTATCCAAC CCTGCGCGAG GCCTTGGCGG AGGCGCCGGC ACCAGAACTG
GCCGTCGAAG CAAGTGCAGC CACTCACTCC TAA
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| Protein sequence | MDPHVSHSAH LFSLRIAHAL SEACVKDKYS VKRFGQDLLA GLTVGIIAIP LAMALAIASG
VAPQYGLYTA IVGGFIIAMT GGSRYSVSGP TAAFVVLLYP IAQQFGLAGL LIATVMSGMM
LVAMAMLRLG RLILYIPESV TLGFTAGIGV VIATLQLKDF FGLHIEHMPE QYFAKLMALG
QALPSLHLPS LLVAAATLAT MLLWPKLKMP VPAHLPAIAL GSILALVLNT MGADIETIGT
RFHYQLSDGS VGTGIPAVLP HFEWPWLQTG ANGQAFEFNL ATFQALLPAA FAIAMLGAIE
SLLCAVVLDG MTGKRHSANS ELLGQGIGNI ITPFFGGIPA TAAIARSAAN VKAGAQSPIA
SMIHAIVVLI GLVALAGILA YLPMSAMAAL LLVVAWNMSE APKAVHLLKT APTSDILVFL
TCFSLTVIFD MVIAISVGII LAALLFMKEI AEMTKLYDIS TNKRYVEQPL PPDWAVIKIN
GPLFFAAADR IFAEIASLTQ DKQVIVLYLD GVSILDAGGL AALNKLIDKC KLNHTKLIVA
DLQFQPIRTL ARAKVQPIEG VLKFYPTLRE ALAEAPAPEL AVEASAATHS
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