Gene Shewmr7_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3008 
Symbol 
ID4256105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3564296 
End bp3565792 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content52% 
IMG OID638123686 
Productaldehyde dehydrogenase (acceptor) 
Protein accessionYP_739049 
Protein GI114048499 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.227807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAC CTAAAAAACG GAGTGATTGG GAAAGCCTCG CTGCTAGCCT AGCAATCAAT 
GGCAAGGCTT ATATCAATGG CGAATACCGC GATGCGGCAG CGGGCAGCAC CTTTGATTGT
GTCAGCCCAA TCGACGGACG CGTATTAGCC AAGGTCGCCA GTTGCGATCT GATGGACGCC
AATATTGCCG TCGCTAATGC CCGTGAGGTG TTTGAATCTG GCGTATGGTC AAAGACAGCT
CCCGTTAAAC GTAAGCAAGT GATGATCCGT TTTGCCGAGT TATTGGAAGA AAATGCCAAT
GAACTCGCCC TGTTAGAAAC CTTGGACATG GGTAAGCCAA TCCGTTTTTC AAAGGCGGTA
GATATTACTG GCGCCGCCCG TGCTATCCGT TGGTCGGGTG AGGCCGTTGA TAAACTCTAC
GATGAGCTGG CACCTACGGC ACATAATGAA ATCGGCATGA TCACCCGCGA ACCCGTAGGC
GTGGTGGCGG CGATTGTACC TTGGAACTTC CCGTTATTGA TGGCTTGTTG GAAGCTGGGG
CCAGCGCTGG CGACGGGCAA CAGCGTTATT CTTAAACCCT CTGAGAAATC CCCCTTAACG
GCCATTCGTA TCGCTGAACT TGCGGTACAG GCAGGGATCC CTAAGGGCGT GCTAAACGTA
CTGCCGGGTT ATGGGCATAC GGTCGGTAAG GCACTGGCGC TGCATATGGA TGTCGATAGC
TTAGTCTTTA CGGGTTCAAC AAAAATCGCT AAGCAATTAA TGATTTATGC GGGCGAATCG
AATATGAAGC GGGTGTGGCT CGAGGCGGGG GGGAAGAGTC CGAACATTGT ATTTAACGAT
GCGCCCGATC TTAAAGCGGC GGCGGTGGCG GCGGCCGAAG CCATTGCTTT TAACCAAGGT
GAAGTCTGTA CCGCAGGCTC GCGTTTGCTG GTGGAGTCTG GGGTTAAAGA TCAATTGATT
GCGCTGATTG CTGAAGAACT CACCTCGTGG CAGCCTGGGC ATCCGCTGGA TCCCACAACC
GTTAGCGGCG CTGTGGTCGA TAAGCAGCAA TTAGATACCA TCTTAAGCTA TATCAAGGCG
GGCCAAGACG AAGGCGCCAG TTTAGTCCAT GGTGGACAGC AAGTGCTGGC CGAAACGGGC
GGCGTGTATG TGCAACCCAC TATCTTTAGC CAAGTGCACA ACAAGATGAA AATCGCCAGC
GAGGAAATCT TTGGCCCTGT GTTATCTGTC ATTGAATTCA ATGGCATGGA AGAGGCGATT
GCGATAGCCA ATGACACTAT TTACGGCTTA GCGGCAGGGG TGTGGACGGC GGATATCAGC
AAGGCGCACA AAACCGCCAA GGCTCTGCGC TCGGGAATGG TGTGGATTAA CCATTATGAT
GGTGGCGATA TGACGGCGCC TTTCGGTGGT TACAAACAAT CGGGCAATGG CCGCGATAAA
TCCATGCACT CCTTCGATAA ATACACCGAA ATCAAGGCGA CTTGGATAGC CCTCTAA
 
Protein sequence
MSTPKKRSDW ESLAASLAIN GKAYINGEYR DAAAGSTFDC VSPIDGRVLA KVASCDLMDA 
NIAVANAREV FESGVWSKTA PVKRKQVMIR FAELLEENAN ELALLETLDM GKPIRFSKAV
DITGAARAIR WSGEAVDKLY DELAPTAHNE IGMITREPVG VVAAIVPWNF PLLMACWKLG
PALATGNSVI LKPSEKSPLT AIRIAELAVQ AGIPKGVLNV LPGYGHTVGK ALALHMDVDS
LVFTGSTKIA KQLMIYAGES NMKRVWLEAG GKSPNIVFND APDLKAAAVA AAEAIAFNQG
EVCTAGSRLL VESGVKDQLI ALIAEELTSW QPGHPLDPTT VSGAVVDKQQ LDTILSYIKA
GQDEGASLVH GGQQVLAETG GVYVQPTIFS QVHNKMKIAS EEIFGPVLSV IEFNGMEEAI
AIANDTIYGL AAGVWTADIS KAHKTAKALR SGMVWINHYD GGDMTAPFGG YKQSGNGRDK
SMHSFDKYTE IKATWIAL