Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3006 |
Symbol | |
ID | 4256103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3562736 |
End bp | 3563593 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123684 |
Product | 3-mercaptopyruvate sulfurtransferase |
Protein accession | YP_739047 |
Protein GI | 114048497 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.148603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATC CTCTCGTGAG TACTCAATGG CTCGAAGAGC ACCTCACCTC GCCAGATCTC GTGTTACTCG ATGCCAGCAT GGCCGTGGTG TTGGGCAAAG AGCCTATCCT CTATTCTGAA CCTGTGTGCA TTCCGCGCTC AAGGCGCTTT GATGTCGAAA CGGATTTTTG CGATAAAACC TCTTCTCAAA TCCACGCCTT ACCAAGGTTT GAACAGTTTG TCGAAGGCAT TGCCAAGCTC GGAATAGACC CGCAAAGTGT GGTGGTTATC TATGATAATC AAGGGATTTA TTCATCTCCG CGCGCTTGGT GGATATTCAA GGTGATGGGA TTTCACCGTG TGTATGTGCT CGACGGTGGT TTACCCCAAT GGATGGCTGA AGACAGAGTT ACCTCATCCC GCTATCAGGA AGAAGGGATA GATTATGGTG CAAGTGATAG TGAAGTACTC ACTGCTGTAT TGGAATATCA GCCTGCCAAG GTGATGGATG CCGAGGCCGT GTTTGCCAAG CTTAATGATA GCGGCAGCGC GATTATCGAT GCCCGCGGCG CCGCCCGCTT TTTAGGCCAA GTGAGTGAGC CACGCCCAGG TGTGCGTTGT GGGCATATTC CCCATTCGGT TAATTTACCT TTTGCAGAGG TGCTCGATGG CTTCAAAATC AAAAGCTCGG CAGAATTACA AACCCTGTTT CAAGGGCTTG CTGGTGATAA ACCGTTAAGG ATTTTCAGCT GTGGCTCGGG CATTACCGCC TGTATCTTAA TCCTTGCGTC ACTCGCTTCT GGCCATGCCG ATGCTGTGCT CTACGATGGC TCTTGGGCCG ATTGGGGCAG TCGCAGCGAT TTACCCATAG CACAATAA
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Protein sequence | MEYPLVSTQW LEEHLTSPDL VLLDASMAVV LGKEPILYSE PVCIPRSRRF DVETDFCDKT SSQIHALPRF EQFVEGIAKL GIDPQSVVVI YDNQGIYSSP RAWWIFKVMG FHRVYVLDGG LPQWMAEDRV TSSRYQEEGI DYGASDSEVL TAVLEYQPAK VMDAEAVFAK LNDSGSAIID ARGAARFLGQ VSEPRPGVRC GHIPHSVNLP FAEVLDGFKI KSSAELQTLF QGLAGDKPLR IFSCGSGITA CILILASLAS GHADAVLYDG SWADWGSRSD LPIAQ
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