Gene Shewmr7_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2988 
Symbol 
ID4256299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3537933 
End bp3538376 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content47% 
IMG OID638123665 
ProductGatB/Yqey domain-containing protein 
Protein accessionYP_739029 
Protein GI114048479 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000480626 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTAA TTGATCAGCT AAAAGACCAT ATGAAACAGG CCATGATCGC CAAAGAGAAG 
GCGAGATTGA GCACTATTCG TATGGCACTT GCAGCCATTA AACAGATTGA AGTGGATACC
CGCGAAACTC TGAATGATGA GCAGGTTATA GCTGTCTTAA CCAAAATGGT GAAACAACGT
CGCGATTCGA TTGCTCAATA TGAAGCAGCG GGTCGTAACG AGTTGGCCGC AGCAGAAGCA
GAAGAGATTC AAGTCATTGA AACTTTCCTG CCAACTCCCC TCTCTGAGGC GGAAATTGCC
GCGTTCATCG ATGCCGCTAT TGCTGAAATA GGCGCATCCT CCATGGCGGA TATGGGCAAA
GTAATGGGAG CATTAAAACC TAAAGTTCAA GGACGTGCAG ACATGGGCGC TATCGGCGCT
ATGATCCGTG CAAAATTGCA ATAA
 
Protein sequence
MSLIDQLKDH MKQAMIAKEK ARLSTIRMAL AAIKQIEVDT RETLNDEQVI AVLTKMVKQR 
RDSIAQYEAA GRNELAAAEA EEIQVIETFL PTPLSEAEIA AFIDAAIAEI GASSMADMGK
VMGALKPKVQ GRADMGAIGA MIRAKLQ